NONHSAT069986

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT069986

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1794 nt

Genomic location

chr2+:32904014..33005264

Exon number

5

Exons

32904014..32904081,32919584..32919804,32977111..32977213,32980634..32980694,33003924..33005264

Genome context

Sequence
000001 ATTTCATTTT TTTCCTGGTA AATTACTTCC TCTGGTATGG TCTTGCCTTG GATTGTTTAT GTTGAAACTA ACATTGTAAG 000080
000081 ATCCATCTCT ATTAAAAAAA ATAAGAAATT ATTAGTGACT TTAAAAAAGT AATGAAATAT TACTTTGGGC ATAATTATAT 000160
000161 TTCTGTCTTT ATATGTTCTG TTTATGTTTT TAGCAACACA AAATTTGAAT GTAAGATTCC TATTTCTTTT TTTTTTTTTT 000240
000241 TTTCCACAAG GTTTTGCTCT GTTGCCCAAG CTGAAGTGCA CTGGTATGAA TTATCACTGT GGCCATGCTG ATTGCAAATA 000320
000321 ACTATGCTCA TAATGCTTCC AGGTTCAGTG CTATCAGCAA GTCTCTCCCA CCCTGGGTTC TAACCACCCC CGACCTTGGA 000400
000401 AAGAGAGGGA GAGGGAGACG GTGGAAAGAG AGGGAGAGGG AGACCGTGGG GAGCAGTAGT AGAGTTGCTG GATCGTATGG 000480
000481 TAGCTCTATA TTCAGAATTT TGAGGATCTG CCAGACTGTT TTCCAAAGTA CCATTTTAGG CCGGGTGTGG TGGCTCACGC 000560
000561 CTGTAATCCC AACACTTTGG GAGGCCAAGG CCGGTGGATC ACTTGTGGCC AGGAGTTCAA GACCAGCCTG GCCAACATGG 000640
000641 TAAAACCCCA TGTCTCCTAA AAATATAAAA ATTAGCTGGG CGTGATGACG CATGCCGTGG TCCCAGCTAC TCAGGAGGCT 000720
000721 GAGGCGGGAG AATCACTTGA ACCTGGGAGG CGGAGGTCGC AGTGAGCAGA GATTGCGCCA CCTTACTCCA GCCTGGGTGA 000800
000801 CAGAGCAAGA TTCTGTCTCA AAAAAAAAAC AAACAAATAA AAAACAAAGT ACCATTAGTC CCACTAGCAA TGTATGAGGG 000880
000881 TTCCAGTTTC TCAACATCCT TGACAACACT TGTTACTAGC TGTCTTTTTT ATTATATCTG TTCTAGTGGG TGGCATCTCA 000960
000961 TTGTGGTTCA ATTTGCATGT TTTGGATGGC TAATGATGTT GAGCATCTTT TCACATGCTT CTTGGCCATT CGTATATCCT 001040
001041 CTTTGGAAAT GTCTATTCAC ATCCTTACCC ATTTTTAAAA TTGGGTCATG TATCCTTTTA TCATTGAGTT GTAAGAGTTC 001120
001121 TTTCTATATT CTAGCTACAA GTCCCTTGTC AGACAAATGA TTTGCAAATA TTTTCTCCCA TTCTGTTAAG TTTTTTTTTT 001200
001201 TTCTCTCTAT TGATTGTGCA CTTTAAAGCA CAAAAGCCTA ATCTTGATGA GGTCCAACTT ACCTGTTTTT TCTTTTGTTG 001280
001281 CTCATACTTT TGGTACAATA TCTAAGAATC CATTGCCAAA TCCAAAGTCA CAAAGATGTA CTCCTATCTT TTCTGCTAGG 001360
001361 AGTTTTATAG TTTTAACTCT TTCATTAAGG TCTAGGGACC ATTTTAAGTT AATTTTATTT ATGATATAAG GAAGGGGTCC 001440
001441 AACTTCATTC TTTTACATGT AGATATCCAG TTGTCTCAAA ACTTTGTTGA AAAGACTATT CTTTTCCTAT TAATAGTCTT 001520
001521 GTCACTCTGG TCAAAAATCA GTTTACTGTA AATGTAAGTG GTCAAAAATT AATTGACTGT AATGTAAGGA TGTATTTATG 001600
001601 GTCCATCAAT CACATTTCAT TGACTGTATG TCACATTTCA TTGACTATAG GTCTGTGCAT ATTCCACTGT CTTGTTTACA 001680
001681 GAAACTTTGT AGTAAGTTTT GAAAATGCTG TGAGTACTCC AACTTTGTTC TTCCTTTACA AGATAGTTTT GGCTATTCAG 001760
001761 CATTCCTTGA ATTTTCCTAT GGGATTTTTA GCTT
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Predicted Small Protein

Name NONHSAT069986_smProtein_869:1159
Length 97
Molecular weight 10851.777
Aromaticity 0.1875
Instability index 60.1533333333
Isoelectric point 8.25042724609
Runs 15
Runs residual 0.022014604811
Runs probability 0.0577047635872
Amino acid sequence MYEGSSFSTSLTTLVTSCLFYYICSSGWHLIVVQFACFGWLMMLSIFSHASWPFVYPLWK
CLFTSLPIFKIGSCILLSLSCKSSFYILATSPLSDK
Secondary structure LLLLLLLLLHHHHHHHHHHEEEEELLLLEEEEHHHHHHHHHHHHHHHHHLLLLLHHHHHH
HHHHLLLEEEELLEEEEEELLLLLEEEEEELLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLH
HHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTToooooooooooooooT
TTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii