NONHSAT070089
Revision as of 23:15, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070089 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
620 nt |
Genomic location |
chr2-:36883465..36884084 |
Exon number |
1 |
Exons |
36883465..36884084 |
Genome context |
|
Sequence |
000001 GATGGCACAT TTGGGTCATG AGACCCACCA CTTCTGAGAT TTCACACTAC TTTGGCAGTC AAGCCAAAGA CATGCTAAAT 000080
000081 GTGATCTTCT CCTCTAATGT ATGCTACAGG GAGATCATCA AGTTATAGTG TGTCCTGGGT GTTGGCAAAT ACACTGCTCA 000160 000161 TGAGGAAAGC TCCTCAGAAT GGGTATTGTG TTTTCATTTT TCACCCAGCA AGAGCAACTT CATCATTATT AACTACAGCT 000240 000241 GAAATTGGCT TATCAAGACC TAGAAGCTGA CCATCTACTA ACTGAGAAAA CCTCATTGAT CACACAGCTG ACTGATGGTA 000320 000321 ACATACAGCT TCTGGAGATA AGGATAGACA GGACATTCAA TGGTCTTCAG CATGGACAAG TACTTTCATG CCGTGGGGAT 000400 000401 GTTTTCAATG CTTCTTTTGA ATGCCTCTGC TCTAACCCTA GTTGCTCCTA TCTTTATGGA TCATGTGGTC AATAGTGAGA 000480 000481 TATGGAATTT TAAAGGAAAG ATTATGATAG GTAAGTTGAA AGGAGAAAAC AAACAGCATC TGCGACACAA GCTAGTTGTG 000560 000561 AACATACCTG ACCAGGTTTT CTGTTGGCCA GACTCTGCTT GTGGCTACAC AGGAAACCTG |
Predicted Small Protein
Name | NONHSAT070089_smProtein_17:127 |
Length | 37 |
Molecular weight | 4179.7956 |
Aromaticity | 0.111111111111 |
Instability index | 42.5194444444 |
Isoelectric point | 7.93963623047 |
Runs | 8 |
Runs residual | 0.0417637917638 |
Runs probability | 0.0396241830066 |
Amino acid sequence | MRPTTSEISHYFGSQAKDMLNVIFSSNVCYREIIKL |
Secondary structure | LLLLLHHHHLLLHHHHHHHHHHHHLLLLHHHHHEEL |
PRMN | - |
PiMo | - |