NONHSAT070410

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT070410

Source

NONCODE4.0

Same with

,

Classification

sense

Length

676 nt

Genomic location

chr2+:44429085..44459860

Exon number

4

Exons

44429085..44429184,44445106..44445217,44445619..44445676,44459455..44459860

Genome context

Sequence
000001 GAGTAATGAG GAGCTCTGTG AATATGTTAA ATCTAGGCTT GAGGTATCTG ATGACCTGGA AAATGTGTGC AATTGGGTAG 000080
000081 TGGACACTTG TTTACACAAG AGATTATGGA GAAGTCTGGC GAGGAAGGAA TGCCTGATCT TGCCCATGTC ATGCGCATCT 000160
000161 TGTCTGCAGA AAATATCCCA AATTTGCCTC CTGGGGGAGG TCTTGCTGGC AAGCGTAATG TTATTGAAGC TGTTTATAGT 000240
000241 AGACTGAATC CACATAGAGA AAGTGATGGG GGTGCTGGAG ATCTAGAAGA CCCATGGTAG CCTTAAAAAC CTTCTAAAAT 000320
000321 GCTTTTGATT CTGAAAATTG GGGGAAAAAA CTTTTAATCA CAATTTTCTT CAATACAAGG GGAAAATATT CTTGCGGATT 000400
000401 CCCAACGTTT TGTGATATGA GCAGAAAATC ATTAGCATTT CCCATCATTT GTTCATATTT GTGTTTTCTG ACAGTTGCCA 000480
000481 CTTGTAGCAT TGCCTGTACT ACAGTATTTT TTGCCAACCT CAGGCATACT CGTTACATCT GTATTGAACT TTCGGCCCTA 000560
000561 GAAACCAGTG GAGTTATTTC ACCACAAATC AACAATGTGC CTGAGGTGCA TGGGAAATAT AGTTAGCTAT ACTCTGAAAA 000640
000641 TACATTATGT TTTTTTTCTT TAAACAAAAC ACACAA
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Predicted Small Protein

Name NONHSAT070410_smProtein_416:625
Length 70
Molecular weight 7630.8832
Aromaticity 0.101449275362
Instability index 54.4
Isoelectric point 8.36273193359
Runs 11
Runs residual 0.0200889654183
Runs probability 0.0539336127572
Amino acid sequence MSRKSLAFPIICSYLCFLTVATCSIACTTVFFANLRHTRYICIELSALETSGVISPQINN
VPEVHGKYS
Secondary structure LLLLLLLLLLHHHHHHEEEEEHHHHLLLLLEELLLLLLEEEEEEEEEEELLLLELLLLLL
LLLLLLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLL
PiMo iiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooo
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