NONHSAT070760
Revision as of 23:19, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070760 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
422 nt |
Genomic location |
chr2-:55283619..55339703 |
Exon number |
4 |
Exons |
55283619..55283693,55287742..55287889,55307625..55307775,55339656..55339703 |
Genome context |
|
Sequence |
000001 CTGGAGGGGC TGTGTCTGGG GAGATGCTTC TCTATAAAAA GCTTAGAGAG AGTTGTCATC GAAAATAACA AGACTATTCT 000080
000081 GGATATGAGT AACACTGAGG AATAAGATAC TAAGCCATTA AAGAAGGGTA TAAAAATTAT GTCTGACACA GGATATGGAG 000160 000161 AGAAATATGA TGAAGATGAA ATATGACAAC AGAATCAAGa gatggtattt tgccatgtta cccaggctgg tctcaaaatc 000240 000241 ctggaatcaa gcgatccacc tgccttggcc tcccaacgtg ctgggattat agctgtgatc caccgtggcc agccCAAGAA 000320 000321 GTCTTTAGCA TACTCTGcca ccagactaaa tcaggttcgc catgttgccc aagctggtcc cgaactcctg acctcaagtg 000400 000401 atttgcccac cttcgcctct ca |
Predicted Small Protein
Name | NONHSAT070760_smProtein_182:400 |
Length | 73 |
Molecular weight | 8019.0498 |
Aromaticity | 0.0972222222222 |
Instability index | 76.1083333333 |
Isoelectric point | 6.50103759766 |
Runs | 8 |
Runs residual | 0.0298053527981 |
Runs probability | 0.0392267267268 |
Amino acid sequence | MTTESRDGILPCYPGWSQNPGIKRSTCLGLPTCWDYSCDPPWPAQEVFSILCHQTKSGSP CCPSWSRTPDLK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLEEELLLLLLLLHHHHHEEEEEELLLLLL LLLLLLLLLLLL |
PRMN | - |
PiMo | - |