NONHSAT071145
Revision as of 23:20, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071145 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1170 nt |
Genomic location |
chr2+:65196935..65199169 |
Exon number |
2 |
Exons |
65196935..65198039,65199105..65199169 |
Genome context |
|
Sequence |
000001 aagcaggctg ccggaaccag cagtggcaac ccgctcgggt ccccttccac actgtggaag ctttgttctt tcgctctttg 000080
000081 caataaatct tgctactgct cactctttgg gtccacactg cttttatgag ctgtaacact caccgcgaag gtctgcagct 000160 000161 tcactcctga agccagcgag accacgagcc catcgggagg aacagcaact ccagaggcgc cgccttagga gctgtaacac 000240 000241 tcaccgcgaa ggtctgcagc ttcgctcctg agccagcgag actacgaacc caccagaagg aagaaactcc gaacacatcc 000320 000321 aaacatcaga aggaacaaac tccagaggcg ccaccttaag agctataaca ctcaccacga gggtccgcgg cttcattctt 000400 000401 gaagtcagta gaccaagaac ccaccaattc ctgacacaaa atgatccatc caaaggaatt ctagaaagcc ccaaagtaac 000480 000481 aatatgggtc tttatatatt aatatggaaa gacatgcaag atacatgtga aataaaagtt gcagaagtat ctataatgtA 000560 000561 GGGGCAACAG GTAgtccagg ttttctaggg actaacgggg ttcctgggat atgggactct agttttgaga cttgaaaagc 000640 000641 cccatgcaaa cagggacaaa ctgatcaacc taGACAATGA CATTTCACTT CTATAATGGT GACAAATATA GTCTATCAAT 000720 000721 TAAGGTTTTT TCAGGTGCAA AACACAGAAA ACCCTGGCTT ATTCGACTTA CACAATGAGG ATGTTTGCCA TCATGCCCTT 000800 000801 AAAGAAGTCC ATATTCAACA TGTCAGCTTG GTTCTCTGGC TCACTCCCTC ATAGACACAG ATGGCTGTCA TGGTTCTAAG 000880 000881 TGTCCAGTTC AAATAAGGTG ACATCCAGCA GAGGAAGACA GGCCAGAATT GCATTGTGGG CCCTCTCTTA AGCCAGCCTT 000960 000961 TGGCACAGGA ATTAGCTTGG ATTTcctgaa caagatgggg ttgtttagaa aagaacaaag gtagatgtta tacagacagc 001040 001041 caacgatgtc tTTTATGTAT ACATTTTTAT ATATCACATA TATATATGCA TTGAAAATTC TGCAActcaa gtgatccacc 001120 001121 tgcctcggcc tcccaaagtt ctgggattgc aggcgttgag ccactgcata |
Predicted Small Protein
Name | NONHSAT071145_smProtein_695:853 |
Length | 53 |
Molecular weight | 6111.9185 |
Aromaticity | 0.0961538461538 |
Instability index | 48.7711538462 |
Isoelectric point | 5.83648681641 |
Runs | 8 |
Runs residual | 0.00347674923946 |
Runs probability | 0.0321497968557 |
Amino acid sequence | MVTNIVYQLRFFQVQNTENPGLFDLHNEDVCHHALKEVHIQHVSLVLWLTPS |
Secondary structure | LLEEEEEEEEEEEEELLLLLLEEELLLLHHHHHHHHHHEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |