NONHSAT071219

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT071219

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2736 nt

Genomic location

chr2-:66554655..66557390

Exon number

1

Exons

66554655..66557390

Genome context

Sequence
000001 ATTCTATCAT CAGAGCTGTT GGAGAAGAAT AAGTGGAGAT TTCATGATGC CCTTCTGGGG AATTTTTATC TTAAAGCATT 000080
000081 TGTTCCAAAC CAGGACAAGA GGGGGTTTGC TTTTTCACTG TGCCTATAGT CTTTCTTACC TGAATAAAAT TGTCGAAATC 000160
000161 TGTGCCTCAT TACATGCAAT ACATAGCATG GAACAGGAAA AAAAAATCCC ATTTGGTAAG ACAGAAATCA TGCTAACAAA 000240
000241 TTTATTTTTA ACTTTCCAAA GAAATACATA ATTCCCTTTG GAAGCAAAGC TTGATAATAG AAATGTAAAC ATTTTACAGA 000320
000321 ATGTTACTTT AAATTAAGAA TGTAAAAAAC AGTAGTCTAA ATACGGTATA AACTAGTATT AGAGCCTTCA CATTTCAACT 000400
000401 TAACTCCCCT TTAACCTTCA ATATATTTCC ATTTTTGGTC AGATTTAGTC AAGCAAGTAT TGATGTCTTC CCTTTTCCTT 000480
000481 TCTCAGATTT TTTTTTCCCA TTGTATAGCC AGCAGGTAAG AATTTGCCAG CACAAATGTT AATTCCTTTT TTTCACTCCC 000560
000561 ATCCGCTGAC AGCCTTTTTG CATTCTCTTC TCTTTCCTCT TTCCAAATTG TCCCCATCTG CCTCCCGCTG TATCTGCTTT 000640
000641 GAAGCTCCAC ACAAAAATGT TGTTGATTCC AAGGATGAGA TTTGTCTTTA TTTTAGGACT TTTAATACCC ACGAATGGAG 000720
000721 AAGAAGGTAC CAATGACGAG GCTTCCCCAG TTGGGAAGTT TAAAGAAAAG AGGGTAAACT GGGCAGAGTG GATAGGCTCT 000800
000801 GAGGATGTTG CTTTTTCCCC TCTGTCCTGG CTTTGCCTAG AGACAGCCCT GCCCAGGGAA CAGTCCCACC GCCCATTTCC 000880
000881 CCAAAGCTCC TTTTTCTCTT CTGCTTAGGT AGCGGTTGCC TGACTTCTCC CTGCAAAGGG AGTCTGCTAG TGTGGCCAGT 000960
000961 GCTGCTCCCA GATGTCCTTG CTTCCCTCTC CTCACTGGTT TCCATTTGAT CCCTGAACTG TCAGATTCCT CTCCCACATC 001040
001041 CCTTGGTTCT CAGATCCTGC ACTGACCACA GCCCTGCTTA GCCACCAGTT CAGAGTTGGG AAGTATAGCC CCGGCCTCTC 001120
001121 CATGTCATCC TTCCTTAGCC TTTTCCTGGT GCTGGGAAAA CACTCCATAC TTAGATGCCA CTCCCGCTAG CGAAACCACA 001200
001201 CTCGGAATAG TCAGAGAAGC TACCTGATTC CCACTTAAGT GTCGATGAAA TTTAGAGACT CATTAGGAGG CCTCTGGATC 001280
001281 ACCGGTGCTG GAGGCAGAGA CAGAGAGAAG TCAAGTGAAC AACCGGAAGC TGCTCCGCTG GTAATGGCGG GCTTCAGGTT 001360
001361 CCTCTGCCTC GGGTCTTGTC CACCCTCACT ATGATCTTCC CCTTTCCTTG CTTCTTTCCG ACTTGTTAAG GAGTCTTCTA 001440
001441 GTGGAGGTCA TTTGTTCACA GTCGTTATTT CTAAGTGGCT GGGGAAGAAG AGAAAAAGAA ACAAACCAAC TAAACACACA 001520
001521 TATTTCTGAA TCTCCTGAAT TTTTTAGCCA AGCTTATAAA AAAAACTAAC TGCAACATGA ATGAAAAATC AACTTTGCAG 001600
001601 AAAGTTGTGA GTACATCTAT CATATTTCAT TTTAACATTT AAATTCTTTT GTACACACTT TATGCTTTCT TTTTACAGCA 001680
001681 ATAAAATTAC AGCAAAACTG AGGACCTGCT GTGCTATGAA ACAACAGCAT AAAGTGCTTT TCTGGTGGCC ACTTAGCTAC 001760
001761 GTGAAGGGCC CAGGTTAACT AAAGTTAGGG AAAACGGAAA TGCTGACATT TCTTTAAACA ATAAAAATTA CAAGTGATTG 001840
001841 CCAGAGTGCC ATGAGTTGAC ATTTACAGAG ATTGTTCTTC GATTATATAT ATGAAATATC ATAAGTAATT AGCTTGTGGT 001920
001921 AATTACCTGC CCCTCATTAT TTTGCTTTTA GAATATTTTT AAAGCTTAGG TTACTAAAAT TTCAAATAAT CCTGGGCCGT 002000
002001 GCTGTCATGG GTCTTTATCC AAATGAATCG TGGTCTCTTG TAAACAGTCC TGTGATCTGA TTTCCATTGG GACAGAAGAT 002080
002081 GTAAAAGGCC AGGGATTTTC AATGGATTTA CACATATACT GTTTCAGTTA AGTTACCAAG GTCGACTTAA CAGACATTTT 002160
002161 CCTCAGAATC CTAAATACAC TTGCCACCCA GTCTCCTTCT GCCGCTCTGG AAGGAATGGG TGGTGAGATG AAAGAGGCTG 002240
002241 TGGGTGCAGG CGGGGAGGCA GCCCGGCCTC AGTGACATTT CCAACATGAT TTCCTTCTGT AGTTGGTACT GTCAGCTAAC 002320
002321 TAGCTTGGTG GCATTTGTTG CTGAAAAGCT GACTCAGAAA GATAGGTGAA CGTAGAGGCA GGGGCTGGAG TGCTCTTCTT 002400
002401 TTGGAAAGTT ATGTTCCGCT GAAGCCATTT TGTGAGGAAC AGATGCCTAC GAAGAAAGCT GGCAACTGGA ATTTGGTTGT 002480
002481 CCACGAAGGC ACTGAAGCAG CGCAGCCTTG ATCCTCAATC TTGGTTCCCC TCCCCTGCCC TTCAGCACAA AAGGAGAGGA 002560
002561 GCTGGCTTTC TCGAGACTCG CTCAGTCCAG GCTGGAACTA TTACAAACAA ATATTAATAA CACTCCATTA CTCTGGCTAC 002640
002641 ATTTTCAATA AAGTTTAAAT AGTCTGAGTT ATGATGATTA GCGAGAAATG TACGGATAAT AAAGGTAAAT GAGATTCATA 002720
002721 TTTAATCCCC AACTCC
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Predicted Small Protein

Name NONHSAT071219_smProtein_656:907
Length 84
Molecular weight 9411.6668
Aromaticity 0.120481927711
Instability index 51.0530120482
Isoelectric point 5.27081298828
Runs 10
Runs residual 0.0195448460509
Runs probability 0.0417682388271
Amino acid sequence MLLIPRMRFVFILGLLIPTNGEEGTNDEASPVGKFKEKRVNWAEWIGSEDVAFSPLSWLC
LETALPREQSHRPFPQSSFFSSA
Secondary structure LLLLLLEEEEEEEEEEELLLLLLLLLLLLLLLLLLHHHEELLLEEELLLLLLLLLLHHHH
HHHLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -