NONHSAT071227

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT071227

Source

NONCODE4.0

Same with

,

Classification

sense

Length

573 nt

Genomic location

chr2+:66672325..66794632

Exon number

6

Exons

66672325..66672428,66681841..66681926,66691241..66691352,66739281..66739426,66775075..66775151,66794585..66794632

Genome context

Sequence
000001 TTTGGCTGAG CTCGTGGCGC TGTTGGCCTA TGCGCCTGGG CTCGCTTGTG TGACCCCCTG GGGCTCACCC AAGTTTCAGC 000080
000081 TGGTCGGAGG ACAGCAAACC CAAGAACAAG GAGCACTGAT ACTAAGTTAC GGATGTAAAA TAAAACACTG GGAAGCAAAC 000160
000161 AGTCTTATAA AGAGGATTTT ATAACATCAG CCCTCTTGGA ACAGAGATCA TGATGACACG GCATCTACTC GTTCAGGAGG 000240
000241 AACCCCAGGC CCTTCCAGCG GTGGCCACAC GTCACACAGT GGGGACAACA GCAGTGAGCA AGGTGATGGC TTGGACAACA 000320
000321 GTGTAGCTTC CCCCAGCACA GGTGACGATG ATGACCCTGA TAAGGACAAA AAGCGTCACA AAAAGCGTGG CATCTTTCCC 000400
000401 AAAGTAGCCA CAAATATCAT GAGGGCGTGG CTGTTCCAGC ATCTAACACA CCCTTACCCT TCTGAAGAAC AGAAAAAGCA 000480
000481 GTTGGCACAA GACACGGGAC TCACCATCCT TCAAGTGAAC AATTGGTTTA TTAATGCCCG GAGAAGAATA GTGCAGCCCA 000560
000561 TGATAGACCA GTC
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Predicted Small Protein

Name NONHSAT071227_smProtein_209:325
Length 39
Molecular weight 4162.8565
Aromaticity 0.0263157894737
Instability index 42.8842105263
Isoelectric point 8.53668212891
Runs 7
Runs residual 0.0115997229917
Runs probability 0.0440608675902
Amino acid sequence MMTRHLLVQEEPQALPAVATRHTVGTTAVSKVMAWTTV
Secondary structure LLEEEELLLLLLLLLHHHHLLLLLLEEEEEEEEEEEEL
PRMN -
PiMo -