NONHSAT071278
Revision as of 23:21, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071278 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
576 nt |
Genomic location |
chr2+:67551758..67552436 |
Exon number |
2 |
Exons |
67551758..67552107,67552211..67552436 |
Genome context |
|
Sequence |
000001 TGTACTTTCC TGCCTTCCTG TTAACGGTAG CATAATCCCG CCATGTGTGC CAGCCCCGTG GCAGAAGGAT GCGTTCATAT 000080
000081 TTTCTGGAGG TAAAAGGGAC CGGTTCAATT TACAGGCTTG ACTACCTCAG CAGTTTCACT AAGTTCTGGT ACATAAATGG 000160 000161 ATGTTTTATT Aaagaagaaa aggaaggggg aagggaagga ggaggaagac gaagaagaag aaaagaagag aaggaaagga 000240 000241 ggtgggaagg agaaTTCGTC TTTTTCTGCT CAATATTATG TCAGTGAAAC CAAATAATGT GTCTCGGTTC CTCCCCCTGA 000320 000321 GCATTCCACC CGGGTAAAAA AGGAACTAAG GCTCACCTCT GCTGAGAGAA GCTGTGCATG GCGAGTGGCC CCCACACACC 000400 000401 TGGCTGGATG ACATCTGAGG GCTCGGAGGT CCCTGCTGCT CAGTGTGCCA GGATGGTCCC ACCGTCCTCA CATTCACATT 000480 000481 TTTTATGGAT GATGCGTCAT TCTGCTAAGG CAACAAAAGT GAAAACAATC AATAGTTCTA CCCAAATACC TGTTATTTTA 000560 000561 AGAATGGGGC CAGAGT |
Predicted Small Protein
Name | NONHSAT071278_smProtein_68:286 |
Length | 73 |
Molecular weight | 8747.898 |
Aromaticity | 0.180555555556 |
Instability index | 70.55 |
Isoelectric point | 9.36578369141 |
Runs | 13 |
Runs residual | 0.0396390916464 |
Runs probability | 0.032000326118 |
Amino acid sequence | MRSYFLEVKGTGSIYRLDYLSSFTKFWYINGCFIKEEKEGGREGGGRRRRRKEEKERRWE GEFVFFCSILCQ |
Secondary structure | LLEEEEEELLLEEEEEEEELLLLEEEEEELLEEEEELLLLLLLLLLLLLLHHHHHHLEEE EEEEEEEEEEEL |
PRMN | - |
PiMo | - |