NONHSAT071540
Revision as of 23:22, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT071540 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
582 nt |
Genomic location |
chr2+:71295752..71300261 |
Exon number |
2 |
Exons |
71295752..71295842,71299771..71300261 |
Genome context |
|
Sequence |
000001 GAAGGAGGTG TCAGGCGGGG AGAGACGCAA ACGGCGGGAC CAGCAGCGAC GGTAGCAGCA GCATGGCCGC GATCTATGGG 000080
000081 GGTGTAGAGG GGTGGAGTTG TGCTCATATC TGGAACAGGC TCCAACTGCA GGCTCATCAA CCCTGATGGC TCCGAGAGTG 000160 000161 GCTGCGGCGG CTGGGGCCAT ATGATGGGTG ATGAGGGTTC AGGTGAGCTC ACTGACTGGC CCAGCTCCAG GTCCTGGATC 000240 000241 TGCTCCTTCC TTCACTCCCT GTCTTTCTCT CCTTAGCCTT GGCTCACTGA GCCCTTGGGG CTTCCTGGGG ACAACTCCTG 000320 000321 AACCTGGCCA TTCCATGTGC AGGATCATGA CTGAGATCAT AGAGGTGCAA ATGCTGGACG AGCTGCTGAC CCTGCTCTCC 000400 000401 AGCAGTGACT TGCACCCAGG ACTCAGATTC ATCCCTCAGC ACAGGGGCCT GCCTGTGTTG ACTTGCTGTC CTTAGGGAGG 000480 000481 AGTTGAAACT GAGGGTAAGG CCATAGATGC CAGGAGATGC CATACCAGTC TGCTAGGGGA AAGGGTGTAG AAGCCCTTCC 000560 000561 AACATCACCT CTCTCTAGGT AG |
Predicted Small Protein
Name | NONHSAT071540_smProtein_62:145 |
Length | 28 |
Molecular weight | 3037.4351 |
Aromaticity | 0.111111111111 |
Instability index | 78.1074074074 |
Isoelectric point | 6.68890380859 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0285108638051 |
Amino acid sequence | MAAIYGGVEGWSCAHIWNRLQLQAHQP |
Secondary structure | LLLEELLLLLHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |