NONHSAT071941

From LncRNAWiki
Revision as of 23:24, 16 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT071941

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

836 nt

Genomic location

chr2-:84267009..84267844

Exon number

1

Exons

84267009..84267844

Genome context

Sequence
000001 TCAATCTCTC ACCCAGGTAC TGCCAGAGCG TCTTCTCACC CAGGAGCTCT GGGACAGACT GAAACAGCTC GGAGCTCCCC 000080
000081 ATGCTGCCTC CTCACCCACC CTGCCAAGCC ATGGCCACAA TCCTGAGCAG TCCGAATGGC TCTTGAGAAT GCTGAGCTGT 000160
000161 ACGCCACCTC CAAGGAGCCA CATCCCTACT GCATTCCGTG CACCAAGGTG GCTAACGGAG GTGGAGGTGT CCTGAATGGC 000240
000241 CCCGCCAGGG CCGCCGCATC GAAGCCCACG ACTATGTCTT CAGAGTCCCT GGTACTGACA GAGAAGGCTT TGAGGACCAT 000320
000321 GTGGCGCCAA GACCTCCTTC TGCGGTTTCA GTGAAAAGAC GATGAACTCC TTCATCTTCT ACAGCAGCTG GACTTCACCA 000400
000401 CAGTGCACCA AGGACTGGAC CTGCACTCTA TCTTTACCCC TTCCGACACC AGATGCTGAG ATGCCACACT CTGAGTGTGC 000480
000481 CTGCCCCTGA GGGCCTCCAC AAATGGGAAA AGCTTCAGAC CTATTTTGGT TCAGACGCCC GTGATGGTGA ATTTGACCTA 000560
000561 CTACATCCTG ACTTTATTCA CTACCTGAGA GAGGTTTTTG AAGTTCAGTT TGCTTAATAG GGATCCCAGA GACAGGTACA 000640
000641 TGGCTAGCAC TGGGGCCCTC AACTTGCTGA CAGCTTTGCA TATCTGTGAT CAGGTTAGCA GTGATCATTG ATTTATCACG 000720
000721 GAAATTACTG GCAATTTTCT GGCCACTATT TTGAATGAAC AAGGAAGCCA CTGATCATTT ATCTAAACCA CAATCTGTGA 000800
000801 ATTCAGGCAC TTGCACAAAG CTGATATCAT TCAGCT
[back to top]

Predicted Small Protein

Name NONHSAT071941_smProtein_452:616
Length 55
Molecular weight 6391.1658
Aromaticity 0.148148148148
Instability index 50.9462962963
Isoelectric point 5.34466552734
Runs 7
Runs residual 0.0330623306233
Runs probability 0.0279354985237
Amino acid sequence MLRCHTLSVPAPEGLHKWEKLQTYFGSDARDGEFDLLHPDFIHYLREVFEVQFA
Secondary structure LLEEEELLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLHHHHHHHHHHHHHHLL
PRMN -
PiMo -