NONHSAT071941
Revision as of 23:24, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071941 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
836 nt |
Genomic location |
chr2-:84267009..84267844 |
Exon number |
1 |
Exons |
84267009..84267844 |
Genome context |
|
Sequence |
000001 TCAATCTCTC ACCCAGGTAC TGCCAGAGCG TCTTCTCACC CAGGAGCTCT GGGACAGACT GAAACAGCTC GGAGCTCCCC 000080
000081 ATGCTGCCTC CTCACCCACC CTGCCAAGCC ATGGCCACAA TCCTGAGCAG TCCGAATGGC TCTTGAGAAT GCTGAGCTGT 000160 000161 ACGCCACCTC CAAGGAGCCA CATCCCTACT GCATTCCGTG CACCAAGGTG GCTAACGGAG GTGGAGGTGT CCTGAATGGC 000240 000241 CCCGCCAGGG CCGCCGCATC GAAGCCCACG ACTATGTCTT CAGAGTCCCT GGTACTGACA GAGAAGGCTT TGAGGACCAT 000320 000321 GTGGCGCCAA GACCTCCTTC TGCGGTTTCA GTGAAAAGAC GATGAACTCC TTCATCTTCT ACAGCAGCTG GACTTCACCA 000400 000401 CAGTGCACCA AGGACTGGAC CTGCACTCTA TCTTTACCCC TTCCGACACC AGATGCTGAG ATGCCACACT CTGAGTGTGC 000480 000481 CTGCCCCTGA GGGCCTCCAC AAATGGGAAA AGCTTCAGAC CTATTTTGGT TCAGACGCCC GTGATGGTGA ATTTGACCTA 000560 000561 CTACATCCTG ACTTTATTCA CTACCTGAGA GAGGTTTTTG AAGTTCAGTT TGCTTAATAG GGATCCCAGA GACAGGTACA 000640 000641 TGGCTAGCAC TGGGGCCCTC AACTTGCTGA CAGCTTTGCA TATCTGTGAT CAGGTTAGCA GTGATCATTG ATTTATCACG 000720 000721 GAAATTACTG GCAATTTTCT GGCCACTATT TTGAATGAAC AAGGAAGCCA CTGATCATTT ATCTAAACCA CAATCTGTGA 000800 000801 ATTCAGGCAC TTGCACAAAG CTGATATCAT TCAGCT |
Predicted Small Protein
Name | NONHSAT071941_smProtein_452:616 |
Length | 55 |
Molecular weight | 6391.1658 |
Aromaticity | 0.148148148148 |
Instability index | 50.9462962963 |
Isoelectric point | 5.34466552734 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0279354985237 |
Amino acid sequence | MLRCHTLSVPAPEGLHKWEKLQTYFGSDARDGEFDLLHPDFIHYLREVFEVQFA |
Secondary structure | LLEEEELLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |