NONHSAT072573
Revision as of 23:27, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072573 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
546 nt |
Genomic location |
chr2-:97260896..97263890 |
Exon number |
2 |
Exons |
97260896..97261368,97263818..97263890 |
Genome context |
|
Sequence |
000001 TCGTTTGCTG ATGCCATGTT GATGGACAAC TAGAACACAG ATCCTGCCAC GTGATCCCTT CCTCCTGTGT TAGCGCCTGC 000080
000081 CTCCAGCACC CTGAAGATGC TGTGTGATAT GTCCTCCTTA CCAAGTTGGT GATGGCTGCC TCATGGTGGG CCCTGGACAG 000160 000161 GTGTGTGGTC CTGCTGAGCT GTCCACGTGT CGGAAGACCT GTTTAAGACA GTCATTTTTG CCTCTCCGCC AACTGTCTTC 000240 000241 AGAGAAACCA TTAGGTTAGG TGATACGGTG CCAGCAAGGG AAGCACCATC GTCCAGGATC TGCAAATCTG GTTCCTGGGA 000320 000321 ACCCCAGACT CCTCAGCAGA TCTGGCTGTA CATGGATCAG AACCACTTCT TCCCCCGCTT AAGCTGTGGT TTGACCCAAG 000400 000401 GGTCAGCATA TAGGACTGCC TGCTGCATTT AATGAAGGTG TTTCCTTTTG GAAGTCTGTG CTACCCTCTG CGCCTAGTTG 000480 000481 GGAGGAGACA TCCATCTGGT CTGGGATTTC GGGAGTTAGA ATGGAAAGCT CTTTGCTAAA GACTGG |
Predicted Small Protein
Name | NONHSAT072573_smProtein_431:538 |
Length | 36 |
Molecular weight | 4064.8472 |
Aromaticity | 0.142857142857 |
Instability index | 47.1514285714 |
Isoelectric point | 9.83990478516 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0347641759406 |
Amino acid sequence | MKVFPFGSLCYPLRLVGRRHPSGLGFRELEWKALC |
Secondary structure | LEELLLLLLLLLLLLLLLLLLLLLLLHHHHHHHLL |
PRMN | - |
PiMo | - |