NONHSAT072752
Revision as of 23:28, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072752 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
519 nt |
Genomic location |
chr2-:99952800..99957159 |
Exon number |
3 |
Exons |
99952800..99953195,99954780..99954854,99957112..99957159 |
Genome context |
|
Sequence |
000001 AAGAATAAAT ATCTTGATCA CTGACACATG CTGTACAAAT AAAATTAGGA AGTCAACTCT TTCCATCATG AGTAACAGAA 000080
000081 CTCAATCGAA TGTGACACAC AGAAATGTCT CAAAAATCTC TAGGAAAAAT GTTAACAAAA GAAAACAAAA AAAAGAAAAA 000160 000161 TGTTCATTCA ACACTAACAG AATGGAAACG CAGTTCAAGC GTCACGGCTG AGCGAGAGCA CAGCTGTCTC ATTTCCAGTC 000240 000241 TGGCGCACTG GACCGTGAAT ACTGAAGCAC GCTCCTGAGA AAGTCCGGCC ACGACAGCCT GCGCACTAAG AAACTGCAAC 000320 000321 TCCCACAATG CTTTGCGGCC TTCCAGTTCG GCCGTGTACC CGGAGGAAAG CAAGGGTCGG ACACCTTGGG TTCCGGGCTG 000400 000401 CTGGGCGGGA GGCGCACGCG CAGAACTGTT CGCCACCCGA CCGCCCGCCC CTTCCTCTGG CGTCCAAGGT GATATCGCGC 000480 000481 GAGGTTCGCA GCCAATAAGG AGGCGGATGT GACGGCCCG |
Predicted Small Protein
Name | NONHSAT072752_smProtein_104:277 |
Length | 58 |
Molecular weight | 6501.3504 |
Aromaticity | 0.0350877192982 |
Instability index | 64.8561403509 |
Isoelectric point | 10.012878418 |
Runs | 11 |
Runs residual | 0.0390350877193 |
Runs probability | 0.042708483885 |
Amino acid sequence | MSQKSLGKMLTKENKKKKNVHSTLTEWKRSSSVTAEREHSCLISSLAHWTVNTEARS |
Secondary structure | LLLHHHHHHHHHHLLLLLLLLHHHLLLLLLLLLEEEEEEEEEELLLEEEEELLEELL |
PRMN | - |
PiMo | - |