NONHSAT072926
Revision as of 23:29, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072926 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
797 nt |
Genomic location |
chr2+:105127003..105128112 |
Exon number |
2 |
Exons |
105127003..105127065,105127379..105128112 |
Genome context |
|
Sequence |
000001 CATGTTCTCA CTCATAGGTG GGAACTGAAC AATGAGAACA CATGGACACA GGGTGGGGAA CATGCATCAA TGAACAAATA 000080
000081 GAAGCTTGCT TAAAATGTAT AGATAATGTA GTTTGTAAGT ACTGAATTTT TTTTTTTTTT TCTTTGTGAG ACAGAGTTTC 000160 000161 GCTCTGAGTG CAGGCTAGAG TGCAGTGGCA TGATCTCGGC TCACTGCAAG CTCTGCCTCC CAGGTTCATG CCATTCTCCT 000240 000241 GCCTCAGCCT CCCGAATATC TGGGACTACA GGTGTCCACC ACTATGCCTG ACTAATTTTT TGTATTTTTA GTAGAGACAG 000320 000321 GGTTTCACCG TGTTAGCCAG AATGGTCTCG ATTTCCTGAC CTCGTGATCC ACCCACCTCG GACTCCCAAA GTGCTGAGAT 000400 000401 TACAGGCGTG AGCCAAAGTG CTGGGATTAC TTGGCCTGGC CAAGTTACTG AAATTTTTAA GAAGGGGATG AGAATAAATA 000480 000481 TCAGCTAAAA TAAAATAATC TAATGAATGG AAATAAACAT GTTTTTGTAC TGAGCTATAG TCAAGGAGAA GAGCATTTAT 000560 000561 ATCACAGTTC CTTTCTAGGC ACCTTGACGG CAGGGATCAT GTTTCATTCC AGTTGTATTC TCCAAACCCC CACTATGGTA 000640 000641 CCTTAAATTA TTAGGTACCC ACTAGATGTT TGTTGAATTT AATTGATTTA GCCCGTTTAA CCTCATCATC AAGACAGAAG 000720 000721 ACCACAGTCC CCTGATGCTG TTATAAATGC AGAAGGCTAG TGTGTTCCAA GTGTCAGTAT GTCTTTTTCT AGATCAT |
Predicted Small Protein
Name | NONHSAT072926_smProtein_41:124 |
Length | 28 |
Molecular weight | 3050.5285 |
Aromaticity | 0.0740740740741 |
Instability index | 42.1740740741 |
Isoelectric point | 4.31610107422 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0400812577283 |
Amino acid sequence | MDTGWGTCINEQIEACLKCIDNVVCKY |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHLEEELL |
PRMN | - |
PiMo | - |