NONHSAT073101
Revision as of 23:30, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT073101 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
749 nt |
Genomic location |
chr2+:109088270..109091617 |
Exon number |
3 |
Exons |
109088270..109088572,109089283..109089355,109091245..109091617 |
Genome context |
|
Sequence |
000001 CTTAAGTCTT TATTGAGAGA CTATGAGCAA GAGAAAGTTC TCTTAAGGAA AGAGTTAGAA GAAATACAGT CAGAAAAAGA 000080
000081 GGCCCTGCAG TCTGATCTTC TAGAAATGAA GAATGCTAAT GAAAAAACAA GGCTTGAAAA TCAGAATCTT TTAATTCAAG 000160 000161 TTGAAGAAGT ATCTCAAACA TGTAGCAAAA GTGAAATCCA TAATGAAAAA GAAAAATGTT TTATAAAGGA ACATGAAAAC 000240 000241 CTAAAGCCAC TACTAGAACA AAAAGAATTA CGAGATAGGA GAGCAGAGTT GATACTATTA AAGGATTCCT TAGCAAAATC 000320 000321 ACCTTCTGTA AAAAATGATC CTCTGTCTTC AGTAAAAGAG TTGGAAGAAA AAATAGgaaa aaatcgacta gaaaggggaa 000400 000401 aattattgct gcagaagaag gagggagaat tgttgctctg atgcttgagt aggtaatgag acgcaggatg aaatgcagat 000480 000481 gtggaacaat tggcctttgc tccgcacaca gacacttcac tatggcagcc agagggaagg caCCGGTGCA AGTAAATTAA 000560 000561 TAGGCCAGGA CAGAAATTCA GATCATAACT GAATTTTTAG AAACAAATAC CAAGAAGTCC TGAACTCAGG AGTTCAAGCT 000640 000641 AAAGAAGTTA ACAGAGATCA ATATTGGATA GGTAAAACAT ATTACAGGTT TCGTTGTGAA AATCAGACCC AGCAGCCAAG 000720 000721 AGGAGGAGTG CACTTATGGA GCATAAATG |
Predicted Small Protein
Name | NONHSAT073101_smProtein_455:559 |
Length | 35 |
Molecular weight | 3844.618 |
Aromaticity | 0.0294117647059 |
Instability index | 46.55 |
Isoelectric point | 11.7131958008 |
Runs | 8 |
Runs residual | 0.0491437081162 |
Runs probability | 0.020513160219 |
Amino acid sequence | MRRRMKCRCGTIGLCSAHRHFTMAARGKAPVQVN |
Secondary structure | LLLLEEEELLLEEEHHHLHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |