NONHSAT074157
Revision as of 23:33, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074157 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
579 nt |
Genomic location |
chr2-:128169021..128173838 |
Exon number |
3 |
Exons |
128169021..128169388,128172425..128172499,128173703..128173838 |
Genome context |
|
Sequence |
000001 GGCAGGCTGC CCAGAGGGCG GAAGGGTCCT CTGCAGAGCT CTGCACGCCT GTCGGCCGAC GGGGACTCTG CACGGCGGGC 000080
000081 TGCGTCACGG CCGCCTCATC GGCTGGCAGC GCAGGAAACC CCGTCACCTT CTCGAGGGAC GCTGTGCTGC TCAGCCCACC 000160 000161 CCAGGCAGGG CAGGGAGGAC AGACACTAGA GAGGCTCCCG GGAGCTCCCT GGCTGTAACT GAAATATCAC GTGGGTGAAC 000240 000241 AAAGGGAGAA ATGTCGATGG CAGCTGTGTT GACCCTTTAC AACATGCAGC GGATTCTGCC AGATCCCACC AACAATCATG 000320 000321 CTTTCTACAG TAACCAAGTG CTGCATCCAA TCATGGCAAT GAAAAACAGT TCTCCTAACT TGTAAATACT TTGATTTGAA 000400 000401 AAAATGGAGT TTCAAATCAT CCTTTTTATT TCTATGAAGA TTTTAATCCA CCTGCAGAAA AAAAAAAAGA ATGTTGATGC 000480 000481 TATCTTGTCC AAATACAAAC ATGACTTTGC CCATCTGTCT GCCTATTTGG CAGACCGTGC AAATGTAAAT TTTTGCAAAT 000560 000561 TCCATGCAGT CTATGAACG |
Predicted Small Protein
Name | NONHSAT074157_smProtein_470:547 |
Length | 26 |
Molecular weight | 2879.5698 |
Aromaticity | 0.04 |
Instability index | 42.896 |
Isoelectric point | 5.27056884766 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0087793676029 |
Amino acid sequence | MLMLSCPNTNMTLPICLPIWQTVQM |
Secondary structure | LEEELLLLLLLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |