NONHSAT074847
Revision as of 23:36, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT074847 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
532 nt |
Genomic location |
chr2+:147353947..147375970 |
Exon number |
7 |
Exons |
147353947..147353987,147354820..147354937,147357242..147357315,147362125..147362211,147372222..147372256,147375653..147375702,147375844..147375970 |
Genome context |
|
Sequence |
000001 TGTCACTGCT CTCCAGCCTG GGCAACAGAG TGGGACTATG TTAAAGACTT CTCTTAACCA ATACTGTTAA GAAAATAAAG 000080
000081 CAGATCACAC ACTGAGAGGA AATATTTGCA ATACACATAA CTGAAGAAGG ACTTATATTT AGACTACATA AGCAACTTTA 000160 000161 TAAGTCTGTG GCCTACTGGA GGGTGAAGAC ACTCACTGGG TGCCATGGCA CAGAGCTGTT CCACAGCCAG TAGATAATCA 000240 000241 AGCAATACTG TTATGAGAAC CGGTACATGC ATTACTTTCT AAAGCTGACA TGTTTCTCCG GGCCCTTCTG CTTTTTAAAC 000320 000321 AATGTTCCCA AAATTCTTGT AGAATTTCTC CACTCGCAAA AAGAACAAAG CTGGAGGCAT CACGCTACCT GACTTCAAAC 000400 000401 TATACTGGGG AAAGGACTCC CTATTTAATA AATGGTGTTG GGAAAACTGG CTAGCCATAT GCGGAAAACA GAAACTTGAC 000480 000481 CCCTTCCTTA CACCGTATAC AAAAATTAAC TCAAGATGGA TTAAAGACTT AA |
Predicted Small Protein
Name | NONHSAT074847_smProtein_266:391 |
Length | 42 |
Molecular weight | 4935.7075 |
Aromaticity | 0.170731707317 |
Instability index | 67.1341463415 |
Isoelectric point | 8.80596923828 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0446034269564 |
Amino acid sequence | MHYFLKLTCFSGPFCFLNNVPKILVEFLHSQKEQSWRHHAT |
Secondary structure | LEEEEEEELLLLLEEELLLLHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |