NONHSAT075020
Revision as of 23:37, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075020 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
888 nt |
Genomic location |
chr2-:155546967..155547968 |
Exon number |
2 |
Exons |
155546967..155547081,155547196..155547968 |
Genome context |
|
Sequence |
000001 ATATAATTGG CTAGAAGATA TACATATATC TATGTAACTT CCTCTAGCAT CCTCCAGTAT GGAGGCTGCA TTAAGACTGC 000080
000081 ATGAAGGAGA GGGAGAGAAG GGAGAAACAG AGCAGCTGGA CAAGAGGACA GGTATAGGGA ATAAGGGAGA AGCCAGTAAG 000160 000161 GCAGGAAAGA CCCTCCGTGA CAAAGGGGCA GGGAACAGAA CTCAAACATT TAATGGCAGG TAACCCAGGT TAGAATGGTA 000240 000241 AATTGAAAGG TGAATATAAA GGGAGAATGG TGAAATGAAT TTTCTGAAAT TAATTGCTGT GTTTATAGTT TTTAGCCATG 000320 000321 CATCGGAATC ACctcaggac tccactccca atcaattata tatctggggg aggaccaagg cgttggtatt tttcagaagc 000400 000401 tccactggtg attctgacag cacagctagg attaagaaac tgATCAATGG GAACGGCATG CCTGTTGCAG AGGAGCTTCC 000480 000481 CTGGGAAATG TCACACACAG AACATCAATC TTCCTTCCCC ACTCCTGAGA TCCCTCATTC TTTGGCACCA GGAACAGTTG 000560 000561 CAATTAGTAA ACCCTGGTTC CCTGCTGTCT CACAAATCGC AAGAGTCCAA CGTGTGGATA TAAACTTTTG TTCATGGGAG 000640 000641 GATCTTTCTC CCAGTGGAAA AGCAACTGGG AAAAGCAGGA CACACTGCAC AGTGACTGCA GTTTCATCCA ATGCCACCAC 000720 000721 CCATGCAGGC ATAAATAATG AACATGGATG GGGGAGTCTG GAGCTGCTGA ATTGAGGAAG AAAGAACACA GAAATTAAAA 000800 000801 TTCTCACAAA GGTTACCATT AAGCTAGAGG AAGACCACAC CACTGTGTGT CCACAAAGAT ACAGAGCCAG GCCGGGTTCA 000880 000881 GCCATGCT |
Predicted Small Protein
Name | NONHSAT075020_smProtein_446:622 |
Length | 59 |
Molecular weight | 6563.5481 |
Aromaticity | 0.051724137931 |
Instability index | 107.320689655 |
Isoelectric point | 8.88787841797 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0250208191385 |
Amino acid sequence | MGTACLLQRSFPGKCHTQNINLPSPLLRSLILWHQEQLQLVNPGSLLSHKSQESNVWI |
Secondary structure | LLEEEEELLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |