NONHSAT075365
Revision as of 23:38, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075365 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1261 nt |
Genomic location |
chr2-:170514642..170517867 |
Exon number |
3 |
Exons |
170514642..170515345,170515703..170515811,170517420..170517867 |
Genome context |
|
Sequence |
000001 TGAAAATGCC CAGCCTACAG AATCTGAAAA GGAAATTTAT AATTAATTAG GTGAATGTAG TATTAAAAGA TGCAAACGGC 000080
000081 ATCTTGGAGG ACTTACAGTC ATACAGAGGA GATGACCATG AAATACAAGA GGTAATCCAG CAGCCAGCAG ATGAGAAGTT 000160 000161 GCAAGAGAAG GCATGGGGTG CATTTGTTCC ACTGGGAGGC AAATTAAAGA AATTTTATGA ATTGTCTCAG CGGTTAGAAG 000240 000241 CAGCATTAAA AGGTCTTCAG GGAGCCTTGA CAAGTACGCC ATATTCTCCC ACCCAGCATC TAGTGCAAGA ACAGGCTTCT 000320 000321 GCTAAAGAGT TTTCAGAAGT TCTTCATTTC ACACTCTGGT TTGATGAACT CAGGATGACA AATCCTGCTA TACAGAATGA 000400 000401 TTTCAGCTAT TATAGAAGAA CATTGAGTTG TATAAGGATT AATAATGTta atttgagaat ggactaatac aGTAGGTATC 000480 000481 ATAAGACTCT ATGATTAAGT ATATTCAGTG GGAGCATTTG CCAAAACTTC CAAACTTGGT ATGAAAGGTT GTACCAAAGT 000560 000561 TCTTAAGGAC CAACCTCCTA ATAGTGTAAA ATATCTTCTA AATGCTCTCC GGTACACAAT AAAACATTTG AATGATCAGA 000640 000641 CTAACTCCAA GCAAATTAAA TCCATGATGC AATAACAGTT CGGGAATAAG CACCTGTTGT AGACAGAAGA CAGTATTCTG 000720 000721 CACTGACTGA GAATACAGTT TTTTAGTGAT TGCAATTACC ATGACATTTT TCTTGCTTTT ATGTCTTCCT CTGTTCCTCT 000800 000801 TCTCTCCTTT AAGATCATGT TCTTATTCCT AAGACTTCTT CTCTATACCC AAATTAGTAA AGTTATACTC TAAAGAGATA 000880 000881 TTGTCCTTTC AAACAGGTAA CCTACAGCAG CTAATTATTG GGGTCTCTAC TGAGAAAAAT TCTGTGACTT TTATCTAAAT 000960 000961 ATTTTCAAAT GTGAATTTTG GGGAAACTAA TATTTATTTG CTTCTCCTAC ATGGCAAAAC TGCCAATTCT GCTATTTGAA 001040 001041 AACCCCCAAT GACTTTATTT TCTACTATCA CTTTTTTCAT GTGCTGCCAC AAAATGAAAA TGTTTAAATA TGTTGTACAA 001120 001121 ATGGTAGCCA ACACAAACTT TTTTGTAGTT TTTAAGAGTT TAAAGTTTTA ATTTTACATT TTGACCTTTT TTGTAAGGGT 001200 001201 GTATGTTATG TGTTTCACCT TTGTTAACAT TAAAAACTGT GATGTGTGCA TAGAATATTA c |
Predicted Small Protein
Name | NONHSAT075365_smProtein_374:466 |
Length | 31 |
Molecular weight | 3620.1047 |
Aromaticity | 0.1 |
Instability index | 41.5 |
Isoelectric point | 9.29852294922 |
Runs | 7 |
Runs residual | 0.0310810810811 |
Runs probability | 0.0455749867515 |
Amino acid sequence | MTNPAIQNDFSYYRRTLSCIRINNVNLRMD |
Secondary structure | LLLLLLLLLHHHHLLLLLEEEELLLEEELL |
PRMN | - |
PiMo | - |