NONHSAT075452

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT075452

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2361 nt

Genomic location

chr2-:172175163..172177521

Exon number

1

Exons

172175163..172177521

Genome context

Sequence
000001 GGTAATGATG AGGGATAGGT AGAAAAGATG GGAAGGGGGT CAGCTTGTAG ATAACCTAGA CTAGCAGGTG TATGACTTCT 000080
000081 AGTCTCTGAA CTGGAGCCAT CTGAGATCAG TTTGAGATAT GGTGTCTTAT AAATGTATTG AGAGAGGTTG AGGAGTTGTC 000160
000161 TATAGAATGG AATGGAGTGA GGTCAGAGAT CAGTGGCAAG GAAGACCACA TAAAGGTTTT TGCACAAACT TGCCTTGATG 000240
000241 GCAAGTCCTC AAAAGTACAA TTATCAAGCT TTCTGTTTAA ACATGCATAA GTCAGTAAAT ATAAACATTA AAATTTGCCC 000320
000321 AAGACTCTTA ACTCAGTTGT ATTTCATAAT TAAAGTGTAC ATTAAAAAGC CAAACTAGTC ATGAAAGTAT TACATACAGC 000400
000401 AAGGGCAGTT TAGATAAGTT AATGTTGCTA TGGGAACCCC AGCAGATCTC CTTGTGTCTC CGTTTAAAAA TCATGGCCCA 000480
000481 AGGTGGTTTC AAAAACAACA GAAGGTAAAA TTATTCTCAC ATTCTCACAC ATGTAAATTG TACTGTCTCT CTCAGTTCTA 000560
000561 AATAGCGGAT TCAAGCCAGC CTCTTGACTG GCACAGTAAA ATTCGGCTTC GTGTCTTTCT ATAATGTATT ACAGCATGTG 000640
000641 AGTTAACCTT TAGAAGCTTC AAAAATACAT CAACCAAATT TGGACTGTGA GACACAAACT GGTCTCTTTT GGGCTCTGTC 000720
000721 CAGCATAGCC TTCCTATTCC ACATGGCTGC GCAGCAGGGC CATTTCCACC AGTGTCTTCT GCTTGCCTGG TCAGTCTTTC 000800
000801 TGTCTCTTAA CCTACCTACA ACAACTTCCT TCTCGGGGTT TGCTGCTAGA TAGAAATGTA GATTTTGGCA CAGAAAGAAA 000880
000881 AGGGAAAGAC CTATTTGGAA TTTTGTCCAT AGATGTTAAG AAATCATGAA GCGTTGCAAA TGTAACTGCT TGGGTATTAG 000960
000961 TTTAAAATAT TTGATAACTG CATGAAATTC TAATTTACCC CTCACATCCA TAAAGCTAGG ACCAGTTGGT TAGGCAGAGT 001040
001041 TTGATATTTA AAAATTCATC TTCTGAGAGA GCTGAATTTC AAAAGGACCA TTTTCTTTCC AGGAGTAAAA GGTATATTCT 001120
001121 TTCATCTTCT TACAGTACAG AAACAATGGA ATATATTGTT TAAATGCACC CTTCATTTTT TTCTCCATTT CTAAAAATTC 001200
001201 ACTTTTGAGC ATCGTCCAAA TGTAAAAATT CTCACACATG AGGAACTGTT TCCGAAGGTT GTGAGAAAGT CAAGATAACA 001280
001281 GTTTCTATTA TTAAAAGTTT TGCATTCGGT ATGACACATT TGCCTGTATT GAAACACCCA TTTAACATTG ACTTCTGAGA 001360
001361 ACTTATTTGC TTTGCCTCTC TCGATTCCAT ATGCTTTGTC TACAAATTGT GAACACGTCC CGGTTTCTAC CCGTGTGTGA 001440
001441 TTCTAAGTCG TTGCTGTACT CTAGCTTGTA CGTGAAAATT CACCCATATG CAGATAGCTG CCCTCTTGGA GGCAAAACTT 001520
001521 AAAGCTATCA GAACCATCTG GATTGTTAAA CCCCAAAACT TCCAACTCAT CAAAGTCCTG AAGCCTGAAT AGATCACACA 001600
001601 TTGTTACTTC TAATTGGTTT TGATGTTTGT TATGCTCCTC ACAAGTGCAG ATAACTTCAC ATTTGCATCA CTAATCGACC 001680
001681 TCTTTCAAAG CCTCTGCTCC TCCTGCTTCC TGCCTCTGTT AGTCATCAGG AGACTTAGTG TTGGCGTGGG TATTTTCCCC 001760
001761 GCTTGTGAAA GTGCATTGTC AATTCTAGAG CATTAAATAT ATGTGAGGTA TTGTTATTAA TCTACAAGGC AGTACACACA 001840
001841 GTATTCCAGC AACAGTGACT TTTTCAAAGG TTTTATGAGA CATTGTAAGA AAGACAGTAT CTTTCCATGG AAAAAAGTGT 001920
001921 TGCCTCAGAG TCAAACAGGA AGCATGGGTC CTAGTTCCTA TTGAACTGCT TAGCTACTCT TAATTTAGCT CTGAATGCTA 002000
002001 GATTTTGTGT ATACTATACA CATTATTTAA TCCTCAAACT CCTAGGAATT CATTTTGATG ATAACCATTT ACAGAAGAGA 002080
002081 TGTTGGGTAA CTTGCTCAGG ATACCACATC TAGTAAGTAG CAGAGTCACA ACTCGGACCC AGAACTCTCT GATTCCAAAA 002160
002161 CCTCTACTTG CTGCTCTAGT AATGGATGGG CCCAAATGCT GCTGGGAAAG GCACCAGGGA AGAAAGAGCT TTCTGAGTCA 002240
002241 AGCAGAAAAC GATAGCAGTG GAGAGGAGTT TGTTTCAGAC GACCTTCAAG GTTATGGCTC ATTCTAGATC CAATCATTCT 002320
002321 AGCAAATAAG TAGGTTACAC TTGTCCACAA TTACAAATTG G
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Predicted Small Protein

Name NONHSAT075452_smProtein_1622:1795
Length 58
Molecular weight 6238.3829
Aromaticity 0.105263157895
Instability index 53.5315789474
Isoelectric point 4.74920654297
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0623957290625
Amino acid sequence MFVMLLTSADNFTFASLIDLFQSLCSSCFLPLLVIRRLSVGVGIFPACESALSILEH
Secondary structure LEEEEELLLLLHHHHHHHHHHHHHHHHLLLLHHHHHHHLLLLLLLLHHHHHHHHHHL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii