NONHSAT075525
Revision as of 23:39, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075525 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
842 nt |
Genomic location |
chr2+:173912856..173916682 |
Exon number |
2 |
Exons |
173912856..173913382,173916368..173916682 |
Genome context |
|
Sequence |
000001 CAAAAATGTG AAGGTAGAAT ATTTTGACTT GCTGTTCAGC CAATAAAATC TCATACCTCA TTAGTGAGTC TTATTTACTG 000080
000081 TGAGGAACTT GATAAGCTAA CCCTTCTCCA CATCTAGGAT AGTTACAGAT TCTCTTACAA ATTCATGGCA ACCTCAAGAA 000160 000161 AGGATGGTGA AAAAGCACTA ATGTACAGTC TCAGGCATGA TAGATGTTTT TTACATCATG GGGAATATGC CAACAATTAT 000240 000241 GAGAGTTATG CCATTAATAT TCCTTACCTG AAAATGCCTT GTATGTATGT GGGTACCCCT TTGAAATAAT TAAACAAGTT 000320 000321 ATACATCAGC TAGTTGCCTT CAGATAGTCA ACATCTCAGA ACATGTCACT TCTCATGGTA CCAAGTATTG CAGAAATGGT 000400 000401 TTGTTTTCCT TTTTGGATTG TACTCTACGC TTACTTGAAT TTCTATCTTT CTTTTTTCTA TATTCCTTTT AGCGCATGAT 000480 000481 TGCAAATACG GCCAGAACAG TGAGATACTA CAGGAGCCAA CCCTTCAATC CTGATGCAGC TCAAGCTAAT AAGAACCATC 000560 000561 AGGATGTCCG GAGTTATGTA CGGCAATTAA ATGTGATTGA CAACCAGAGA ACTTTATCAC AGATGTCACA CAGATTAGAG 000640 000641 CCTCGTCGAC CATAGACATT TCAAATGCCC AAAGCAACAG TTTGTCTCCA GTCCACAATC TTTCAAAAAT GCCATTTATG 000720 000721 CTACTACTGA CTGTATTGCC ACTAGAGAAT TCTACAAAAC AAGCAAAAAC ACATCCTGAG ACACCTCAGG GCTGCATTCA 000800 000801 GCTTACCAGC TACCTAGCAA GAGAAGGAAT TATTTGACAT GC |
Predicted Small Protein
Name | NONHSAT075525_smProtein_362:478 |
Length | 39 |
Molecular weight | 4535.4506 |
Aromaticity | 0.289473684211 |
Instability index | 63.0847368421 |
Isoelectric point | 3.99884033203 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0284843667197 |
Amino acid sequence | MSLLMVPSIAEMVCFPFWIVLYAYLNFYLSFFYIPFSA |
Secondary structure | LLLLLLHHHHHHHHLLHHHHHHHHHHHHHHHEEEELLL |
PRMN | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiii |