NONHSAT076111
Revision as of 23:42, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076111 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
900 nt |
Genomic location |
chr2-:191887889..191893959 |
Exon number |
4 |
Exons |
191887889..191888454,191890029..191890134,191892241..191892420,191893912..191893959 |
Genome context |
|
Sequence |
000001 CAGAGTCATT CCTGGTGGTA TCTTGGGCAA ACTGCACTGA TTTTACAGag tgcacaagaa gcatggaacc tgcatctgca 000080
000081 tgtgaggccc ttaggctgct tctactcatg gcagaaggca aagggaagcc ggtgtatgta gagatcacat ggcaagaagc 000160 000161 gaagcaagag agagagtggg gaggtgccag gctctttata acaaccagct cttaaaagaa ccaacagagc tctacaagaa 000240 000241 gcatggcact ggtacctgca tctgatgaag gccttaggct gattccactt atggaggaag gggaagggaa gctgggatat 000320 000321 gcagagatca catggtttca tcagactgcc aaagaggtcc atgtcacaaa aactagttaa gaatcccAGC TTTGGATAAA 000400 000401 GACCACAATT CGCAACAGAT CTTTCCAAAG TCACGTATTa tttagtcccc tcttagtctt caactcatct ctcttcactc 000480 000481 ctccccaaca gcttcttatc caccaaaaca tctgcacaca agactgactg aactactttc agtttctttg atggcccatg 000560 000561 ttctctctgt ttcccctgcc acatcctctc aattctccaa ccccatccca tatatccctg cacctggata atgtttacgc 000640 000641 attcttcagg ctctggaaag ccttcctgcc aaacacacac acatacatac acacacacac acacacgcaT GTGTGCGCAT 000720 000721 GGCTCAGGTC ATGCCACGCT Tcctccatag catcctctac atccccggca cagtgcttat ctcctttggt gtaaatgata 000800 000801 tcatctattt tcctcaatag actctaagca agctctgtat gtacatggac caagacagcc ctgctcacag ttatatccct 000880 000881 ggaatctagt acaatctggc |
Predicted Small Protein
Name | NONHSAT076111_smProtein_557:793 |
Length | 79 |
Molecular weight | 8791.0054 |
Aromaticity | 0.115384615385 |
Instability index | 70.5987179487 |
Isoelectric point | 8.64227294922 |
Runs | 9 |
Runs residual | 0.0182926829268 |
Runs probability | 0.0468409586057 |
Amino acid sequence | MFSLFPLPHPLNSPTPSHISLHLDNVYAFFRLWKAFLPNTHTYIHTHTHTHVCAWLRSCH ASSIASSTSPAQCLSPLV |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLEEELLLLHHHHHHHHHHL LLLLLLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |