NONHSAT076286

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT076286

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1625 nt

Genomic location

chr2+:200757788..200759412

Exon number

1

Exons

200757788..200759412

Genome context

Sequence
000001 TTGATACCCT TTTCTGAGGA GGTTGGAATC AACCCAACTG AGAGAATGAA CTGTGGAGAT TGCCAGTTGT GTAGAATGAA 000080
000081 CAGTTTGTCA AGGTGAATCA AATATCTCAT AGCTAGTTTG AAAGGAAGGC AGATGTAATC TTGAATGATT CACACAAATT 000160
000161 CATAAGGTGT TAAAGGCATG aaaataaatt ttaaaatact taaaaaaaaG gtgaaggaaa aaaccgcttc gacgtgggag 000240
000241 ggctgcaaga gaagcaagga catcagagct cagggcaact tccattaatg caagaaacct caggaaagag gttgaggtca 000320
000321 tacggtgttt tgttgatcgc agagttagac atgctgggtg gcattttgga gatcatgata aaagaatttg gaagctaagg 000400
000401 aaaaggtaaa tagggCATTA TGCACCTTGT ACCCGATTTA CAATTCACAT AGAATCCAAC TCCGTGAGTT CTGCAACATG 000480
000481 AAGACCCTGG AGGTTGTAAT TGGAGGAATA TGAGAATAGG CATGTTGAGG ATGCTTGGCC CAAATGGAGA TTAACAGAGG 000560
000561 TAGAGATGTG AGACAAGATA GAACTATGTC TTACAGTCTC TAAAAGGAGG GTGGGACTTT AACTTTAAGG TATCAATATT 000640
000641 TTTGTTTGTT GATAATGCAG CTTGAGAGCC AGCATTCACG ATGGCTTCCC CAAGAAGTAC TAAATCCTGA GATTCTTAGT 000720
000721 TTCTAAATAT TTCTCTAGTT AATCCTCTTT TCCCACTCCC CTCTGTTACT GCCATAGTTC AGGATCTCAT TTTCTTTCCC 000800
000801 CTGGGGTTTT GCCGAAACCA GAGTCATTAT TTGCTATGCC CCCATACGCT AAActcgtta ttttcccaca atgtcaattt 000880
000881 aactggcatt ttctacccat gccatgcctt cctaccccca catgcctttg tacttgttct cttctcctgc cttgtccttt 000960
000961 ctctccttgt tttccaggta acaaccagtc tgatttctgc cttcaggccc attttgaata ccattctgta aacacttttt 001040
001041 tgactactcc caccactttg attttacaaa cattacaatt cctcatctgt gtctctgcta ctttgcagaa gtgatttgta 001120
001121 tttgtttcct caattatact ataaattcct tgggccaaaa attatttctt atatatgttt cagtccagtc tttcatacac 001200
001201 agtaagttct cactaagagt ttgttgaata aataaTGTGA TGCATCAAAT GACACATCCA TTTCTGTTTT TCACCAAAGG 001280
001281 GTATCTCTAA ATATGTTTCC TCTTTACTTT CTCGTTAACA TCAAAGGTAG GTGGTCCCTC AATTCTCTCT TAAGTTCAAT 001360
001361 CATAAACAAA GCCCTTACTC CCAGGTTTTT TAATCCAAGT GACTTTATCA GTTCTTTCAT TTTCTTATTT ATCTCCACAC 001440
001441 TCTCTCCTTT TCAATTTGCT TTATATTTTC TGCTGTCAAG TATATCAGGT TTCAGTTATT CATCCACAGG ATCACCACCT 001520
001521 TGACTCTGCT GCTCCTTATA GATACTTCAT TTGTGCCAGA TCTTCCCGCC AAGGCGAGCT GTAAAAGCAT CTGTTTATTC 001600
001601 TTCTTGTCCA TCAGGTAATT GTGAG
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Predicted Small Protein

Name NONHSAT076286_smProtein_1292:1522
Length 77
Molecular weight 8587.8866
Aromaticity 0.210526315789
Instability index 51.4328947368
Isoelectric point 9.81976318359
Runs 11
Runs residual 0.00332728372656
Runs probability 0.0648857413563
Amino acid sequence MFPLYFLVNIKGRWSLNSLLSSIINKALTPRFFNPSDFISSFIFLFISTLSPFQFALYFL
LSSISGFSYSSTGSPP
Secondary structure LLLEEEEEEELLLLHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHLLLHHHHHHHHH
HHHHLLLEELLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHH
HLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTT
Tooooooooooooooo