NONHSAT076331
Revision as of 23:43, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076331 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
924 nt |
Genomic location |
chr2+:201696119..201697042 |
Exon number |
1 |
Exons |
201696119..201697042 |
Genome context |
|
Sequence |
000001 acgtgcctgt aatcccagct acttgagagg ctgacacagg agaatcactt gaaccaggga gttggaggtt gcagtgagct 000080
000081 gagatcatgc cactgcgctc caggctggag acagagcaag actctgtctc agaaaaaaaa aaaaagagag gtcatgtctt 000160 000161 ttcccttccc tcttcctgct agctgggaag tagacatgat gaagaatcat ttgctgagaa ttgcagtgca acaaaataga 000240 000241 gcctgagttc ctgacattaa agttcggcat tccatccctg gacaacctac atccctagac ttttttcagg taacaaaaaa 000320 000321 aCCTGTTTAT TTTTACTGAT TGCTGGGTTC AATCCTGAAT Ggtcatttag aaatatggag gaaaatagca aaacaaacag 000400 000401 tcaaaatagA CTTAAGAAGG AGAAAACCTG AATACATCAT CATAGAGGGA ATAAAAGCAA GTATTATTAA GCCATCGAtt 000480 000481 attaagctat tatctctcag cttcaaacac accattttgt cttctgcgat gctggggctg gaactctgca gactggattt 000560 000561 cttatgccat ctggttccca attagacttc ctacaggtga ttctagagga agactagaat gatgaaagag gaagaagggc 000640 000641 ttgctccttt ttgcttcttt ttcctgtcag tgtcactaca gcaatggttc ttcaccctgg cagtggcact tggttccagt 000720 000721 ttgcagtttg tccacactac cacagtcaat ctcattgtca ctcaaatacc agcaccagcc agccagaatt tccctctgaa 000800 000801 aaatctattc ctggccgggc acggtggctc acgcctgtaa tcccagcact ttgggagacc aaggcaggcg aatcatgagg 000880 000881 tcaagagatc gagaccagcc tggccaacat ggcgaaaccc cgtc |
Predicted Small Protein
Name | NONHSAT076331_smProtein_683:877 |
Length | 65 |
Molecular weight | 7132.8995 |
Aromaticity | 0.109375 |
Instability index | 69.2765625 |
Isoelectric point | 6.95318603516 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0440832989854 |
Amino acid sequence | MVLHPGSGTWFQFAVCPHYHSQSHCHSNTSTSQPEFPSEKSIPGRARWLTPVIPALWETK AGES |
Secondary structure | LEELLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLHHHHHLL LLLL |
PRMN | - |
PiMo | - |