NONHSAT076794

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT076794

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1936 nt

Genomic location

chr2+:217080782..217084704

Exon number

2

Exons

217080782..217081687,217083675..217084704

Genome context

Sequence
000001 TTAAAATGTG CACAAGAACA GGCCACAATA TGCAGCTAGC TGAAGTGCTG GAAAACCTGG CATGCCTTTG AACTTCTACA 000080
000081 GGAGTTCCTG CCCCTAGTGG GTAAGTTACC TATTGCACTG ACTTTATGAA GATATCTCTT CCAGTGCCCT TAGTGTGAGC 000160
000161 ATCCCCACAA ACCTTATGAA CCAGTTGAAT CCAACCTGAA TGCCTCTCCA TAAGCCCGGA GCCCACAAAT GCATTTTCTC 000240
000241 CAGGGCCCTT GGATGGAGGG AATCAGGAAG GCCTCCTCCA AACCCAAGGC TAGGAGAGAT GTTCCCTCCG GGGTCCAGGG 000320
000321 AGGAGAACAG AAAGGACTGA GAAGAACTAG GAATGCCCTC CCAAACCCAA GGCCAGCAGG AGGGTCTCCT CCGGAGTTCC 000400
000401 ACAGATGGAG GAGGCCTAAA AGAAGAAATC AAGTCTGCAA CCTAAAAGTG GGAGATCTTG GATTTTGATA GCACTTACCC 000480
000481 AGATCCTTTC CCAGCATAGT CAGGAACAAC TGGACTTTTT CAAAGGGACC TTGGCTGTAC CTGGTGTCCT GGGTGACACA 000560
000561 GGAAAAGGAA TTCAGGGGCT GCTTCAGAAT CCCATCTTTG CCAGATACGT TAACTTTAAA AAAAAAATCA TAAGATACAA 000640
000641 ATTTAGAAAA ATGGAGACAC TATTTCTTAA GGGTGACAGC CTGCCAGGTG GCCATCCTGC AGGCCAGGAA GCACAGCCTC 000720
000721 CTCCAGCAGA AGCCCAGAGA CAGGCACCTC CAAGGAGGAG GGGTTGGGGT AGGAGTTTTA TGCTTTTATG CTGAATGGGT 000800
000801 TGGCTTAACA CATATTCAAC AGGTTACAGG AGGAGCTATG AATATTAATG AAAGTGGTCC TGATGCATGC ATATTAAACA 000880
000881 TGCATCTTAC ATATGACACA TGTTCACCTC TCTCACACAC ATACACATAT ACATTGTTAT TCCACACACA AGGCATAATC 000960
000961 CCAGTGTCCA GTGCACATGC ATACACGCAC ACATTCCCTT CCTAGGCCAC TGTATTGCTT TCCTAGGGCA TCTTCTTATA 001040
001041 AGACACCAGT CGTATAAGGA GCCCACCCCA CTCATCTGAG CTTATCAACC AATTACATTA GGAAAGACTG TATTTCCTAG 001120
001121 TAAGGTCACA TTCAGTAGTA CTGAGGGTTG GGACTTCAAC ACAGCTTTTT GGGGGATCAT AATTCAACCC ATGACAGCCA 001200
001201 CTGAGATTAT TATATCTCCA GAGAATAAAT GTGTGGAGTT AAAAGGAAGA TACATGTGGT ACAAGGGGTG GTAAGGCAAG 001280
001281 GGTAAAAGGG GAGGGAGGGG ATTGAACTAG ACACAGACAC ATGAGCAGGA CTTTGGGGAG TGTGTTTTAT ATCTGTCAGA 001360
001361 TGCCTAGAAC AGCACCTGAA ATATGGGACT CAATCATTTT AGTCCCCTTC TTTCTATAAG TGTGTGTGTG CGGATATGTG 001440
001441 TGCTAGATGT TCTTGCTGTG TTAGGAGGTG ATAAACATTT GTCCATGTTA TATAGGTGGA AAGGGTCAGA CTACTAAATT 001520
001521 GTGAAGACAT CATCTGTCTG CATTTATTGA GAATGTGAAT ATGAAACAAG CTGCAAGTAT TCTATAAATG TTCACTGTTA 001600
001601 TTAGATATTG TATGTCTTTG TGTCCTTTTA TTCATGAATT CTTGCACATT ATGAAGAAAG AGTCCATGTG GTCAGTGTCT 001680
001681 TACCCGGTGT AGGGTAAATG CACCTGATAG CAATAACTTA AGCACACCTT TATAATGACC CTATATGGCA GATGCTCCTG 001760
001761 AATGTGTGTT TCGAGCTAGA AAATCCGGGA GTGGCCAATC GGAGATTCGT TTCTTATCTA TAATAGACAT CTGAGCCCCT 001840
001841 GGCCCATCCC ATGAAACCCA GGCTGTAGAG AGGATTGAGG CCTTAAGTTT TGGGTTAAAT GACAGTTGCC AGGTGTCGCT 001920
001921 CATTAGGGAA AGGGGT
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Predicted Small Protein

Name NONHSAT076794_smProtein_899:1078
Length 60
Molecular weight 6804.992
Aromaticity 0.0847457627119
Instability index 62.7661016949
Isoelectric point 8.64227294922
Runs 7
Runs residual 0.0258124708443
Runs probability 0.0633532692357
Amino acid sequence MFTSLTHIHIYIVIPHTRHNPSVQCTCIHAHIPFLGHCIAFLGHLLIRHQSYKEPTPLI
Secondary structure LLLLLLEEEEEEEELLLLLLLLEEEEEELLLLLLHHHHHHHHHHHHHHLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii