NONHSAT076943

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT076943

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1455 nt

Genomic location

chr2+:219575568..219620136

Exon number

3

Exons

219575568..219575760,219591992..219592070,219618954..219620136

Genome context

Sequence
000001 AGACTCTCGG TCTGTCCGCT GGGGGCGCGC GCGGTGTGTG GCAGGCGGCA GCGGCGCTGG CGGCCGAGTG CGCTTGTCAC 000080
000081 GCGTGGCGGT GCGTGGTTGC TAGGGGCGCC TGAGGCTGCC GGGTAGCCCA GCAGGCCGAG GGAGGAAGTA GCGTGGAGCC 000160
000161 GGTGCCGAGC CGGGGCGAAG CTGGATCCCC TAGatagact gtcttcaagc tcactgatat tttcctctgc ttgatccatt 000240
000241 gtgctgttga gagcctctag taaatttttc agAAACCCAG TTCCTCAAAG GACAGTGAGG ACACCAGCAA AGAGCCCAGC 000320
000321 CTTTCTACCC AGACGTTACC TGTGATCAAG TGCTCTGGGC AGACTTCAAG ACTTTCTGCT TCCTCCACTT TCCAGTCAAT 000400
000401 CAGTGACTCC CTCCTGGCTG TGAGCCCATA ACTGGCCTCT CTCCAAAAGC CTCTGCCCAG GAGCATGGGC ATCAGCTACC 000480
000481 TCACGGGAAC CAGCCTGCTG TTCAGACCAG TCTGACCCCC TACCCCTTTC ACCCTGTCCC TCCTCAGAGT ATTTTTTGAA 000560
000561 GTGGTTGCAT TATAGAGATG GGTATTTGTA GGGCCGGAGG GATGGTAGTG ATGGGGAGAA GGTGAGGAAG GGTCACCCTC 000640
000641 TGTCACCTGT CTGCCTGGCT GGCACCTCAT ATCTCAGCAG AGAAGCCAGT GGTGGCCACG CAGCCTTATA AAGCAGGTTT 000720
000721 TGGTTTCTAC CTTAAGTGAG CCATGTGTGG TTTGTCTGGG GGCCCTGGTG TGGTTGCTGA GTTGTAGCTC AAGAGGAGAA 000800
000801 AACATACAGA ACATATTTGG ACCGGAAATC CTTTGTTCTG AATTTGAGGG GGTCTTCTGA GGTCCTTACT TCCTTAGGTC 000880
000881 TTTCCTCACC CCTCTCCCAC CGCTGTCCTG AGGAGAAACC CTTGAACTTC CTCAGTAGAC AGGCGGAGAG GCCACAACAT 000960
000961 GCCGAACCCA TTTCCTGTCA TCCTAGTCTT GGGTCTTCAC CGCCTCCTTC CAAATACCCA CCCTGCCAGC AGCCCTAGGT 001040
001041 CTTCCTGTTC TGACCCCCCA TCACTGCTCG TTCAGCCTTC TAGATGTCTC TCTCGTGGAC ATCTGTTCTT TAGCTGTTGG 001120
001121 CTTTCTCTGA GGTGTGAGAG GGTCTATGAA CTTTGTGAAT TTCCCATGGC CCCAGTGAAG GAGCCCAGAT AATCCCAGTA 001200
001201 GCTGTTACCT GTCTCCATGT ATCAAAGGAC ACAGTCCAGG GGGAGGGTGG AAGGAGATGT GGTTTCTCTA TAGTGCAACA 001280
001281 AACATGGTTT CTCAATGTTC TGCTGTGCAG CAAGCAGGGT CTGGCGGCTT GGTAGGTGGG TTTCAGGAGC AGTCACTATT 001360
001361 GTAGGATGGG CTTCCAATCA AACCTCAGAC TAAACTCTTG TACTGAACTG ATTCTACCTC CCTCCTCTAG ACTCAGTAAA 001440
001441 CAGTGACTAT TCAAT
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Predicted Small Protein

Name NONHSAT076943_smProtein_1256:1363
Length 36
Molecular weight 3696.1475
Aromaticity 0.114285714286
Instability index 42.4571428571
Isoelectric point 3.99884033203
Runs 8
Runs residual 0.0474576271186
Runs probability 0.0107313195548
Amino acid sequence MWFLYSATNMVSQCSAVQQAGSGGLVGGFQEQSLL
Secondary structure LEEEEHHHHHHHHHHHHHHHLLLLEEELLEEEELL
PRMN -
PiMo -