NONHSAT077079
Revision as of 23:47, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077079 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
451 nt |
Genomic location |
chr2-:220913543..220913993 |
Exon number |
1 |
Exons |
220913543..220913993 |
Genome context |
|
Sequence |
000001 TGATCAGATT TACAATGTTA TTGTTACCAC CCACGCATTC ATCATTATTT TCTCTATGGT GACACCAATC ATAATTGGAG 000080
000081 GATTTGGTAA CTGGCTAGTC CCTCTGATAA TTGGTGCACG CAATATGGCA TTTCCCCAGA TAAATAATAT GAGCTTCTGA 000160 000161 CTCCTCCCCA CCATTTTCCT ACTCCTACTT GCATCCTCAA TAGTAGAAGC TGGTGCTGGG ACCAGCTGAA CAGTTTATCC 000240 000241 CTCTTTAGCA GGGAACCTAA TACATGCAGG AGCCTCCTGT GGATCTAACC ATCTTCTCAC TCCACTTGGC AGGTGTTTCT 000320 000321 TCTATTTTAG GGGCCATTAA CTTTATTACT ACGATTATTA ATATAAAACC CCCAGCTTTA TCCCAATATC AAACACCCCT 000400 000401 TTCTTCTGAT CAGTCCTCAT TACCATAGTC CTTCTACTCC TCTCTCTTCC T |
Predicted Small Protein
Name | NONHSAT077079_smProtein_263:427 |
Length | 55 |
Molecular weight | 5765.5844 |
Aromaticity | 0.0555555555556 |
Instability index | 55.9888888889 |
Isoelectric point | 4.53509521484 |
Runs | 8 |
Runs residual | 0.0145438121048 |
Runs probability | 0.043664988518 |
Amino acid sequence | MQEPPVDLTIFSLHLAGVSSILGAINFITTIINIKPPALSQYQTPLSSDQSSLP |
Secondary structure | LLLLLLEEEEELHHHLLHHHHHHHHHHHEEEEEELLLLLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiii |