NONHSAT077431

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT077431

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1156 nt

Genomic location

chr2+:233562015..233601356

Exon number

4

Exons

233562015..233562102,233568134..233568199,233589284..233589401,233600473..233601356

Genome context

Sequence
000001 GTGACGTGCG TGGCGACGTG TCGGCCATCT TGTGTTGTTG AGGCTGAGGA CTGACTGGGG TTCTGAGACT CCCTGTCCCG 000080
000081 GACCGCAGCG TTAAAAGGAT CTGAACAAAG TCTGCTCAAA TCTCCTGCTG TGAACCAGCA GAATTTTTGA ACAGagactg 000160
000161 tctcgctctg tcacccaggc tagagtgcag tggtgctatc gtaactcact ggagccctga tctaggctca aaccatcctc 000240
000241 ccacctcagc ctcccaagta gctgggacta agATGTGTTT GGACCCCGAA TATGGAATTC TCATGGAATT TTGAGATCCA 000320
000321 TCACATTGTA GTGTGGCTTC CCCCCCTCCC CTCCTTCCTT TTTCCCCAAA GTTGGTGATT GAAGATCCTC TCTTCAGTGG 000400
000401 CATCAATAAT AATAATTACT TTTTCTATTC AAACCTCGGG CAACCCCTTT GGTAATATCA GAAGTAGTAT CTAAAATAGA 000480
000481 TAAATTGGAT TTGTGTCTTA AACTCTTGGT TGTTCAGGTG GGAGTGGTTC AATAAATGAT GCAGACTTCC TGTAGTAACT 000560
000561 CTATTTGAGG AGTCTTATTA ACTTATCCTA TTAGAAATAT TTCTTTTTAT TAATATATGT AATCTCGAAG TTTTCTTAAC 000640
000641 CTTTATAGCC AGCATTTGGA GACTGAGGAG AAATCACTAT TTGAAGTTCT AAGAACCGAT GGAACTCCTG TATTTTGAGA 000720
000721 GTTTATTTAG AACATGTTAA CCTAAGTAAT GCTGTACTTG TTTTAGTTAT TCCTTTATAT TTTTAAAATG ATTTTCTTAG 000800
000801 TATCAAATTA ATATGTTTCT AAAAAAATTA GAAATAACTA GTAAGCCAGA Aataatttca acatccatgg tacacactgt 000880
000881 aaataccttg gtgtatcttt ccaggtggtt ttatgtatgc ttatttgtgt atatatacac ttatttttta caaaaatggg 000960
000961 atcatactgt accttcagtt ttgtagcctg cttaaagaaa taaccaaatc agaaacatct ttttttaatc aataaatatt 001040
001041 ttctgttgta ttaaatggtt gcattgtatg gatgtaccat catttattca actagtcttc tagatgtgac atatagaagc 001120
001121 tgttcttgat ttttcattat aaaaatattt ttaatg
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Predicted Small Protein

Name NONHSAT077431_smProtein_812:985
Length 58
Molecular weight 6894.1228
Aromaticity 0.19298245614
Instability index 42.0633333333
Isoelectric point 8.85345458984
Runs 8
Runs residual 0.0135964912281
Runs probability 0.0461159689102
Amino acid sequence MFLKKLEITSKPEIISTSMVHTVNTLVYLSRWFYVCLFVYIYTYFLQKWDHTVPSVL
Secondary structure LLLEEEEELLLLEEEEELEEEEEEEEEEEEEEEEEEEEEEEEEHHHHHHLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTooooooooooooo