NONHSAT077432
Revision as of 23:48, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077432 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1264 nt |
Genomic location |
chr2+:233562015..233601358 |
Exon number |
6 |
Exons |
233562015..233562102,233565295..233565364,233568134..233568199,233599127..233599196,233599865..233599948,233600473..233601358 |
Genome context |
|
Sequence |
000001 GTGACGTGCG TGGCGACGTG TCGGCCATCT TGTGTTGTTG AGGCTGAGGA CTGACTGGGG TTCTGAGACT CCCTGTCCCG 000080
000081 GACCGCAGAT TATAGTGGGA CCAGTCTCAT TAGGTTGAAT CTACAGCCTA TGTTGGTGTT AACCCAGGTC TCTTAGAGCG 000160 000161 TTAAAAGGAT CTGAACAAAG TCTGCTCAAA TCTCCTGCTG TGAACCAGCA GAATTTTTGA ACAGagacca cgtctccacc 000240 000241 tcctgggctc caacgattct cccatcttgg cctcccaaag cgctggattt acagGTTTCT TCACATATAA AAATCTATTG 000320 000321 TAAAAATACG GAAAAGAATG GCAGCGGAAA CGCAGACACT GAACTTTGGG CCTGAATGAT GTGTTTGGAC CCCGAATATG 000400 000401 GAATTCTCAT GGAATTTTGA GATCCATCAC ATTGTAGTGT GGCTTCCCCC CCTCCCCTCC TTCCTTTTTC CCCAAAGTTG 000480 000481 GTGATTGAAG ATCCTCTCTT CAGTGGCATC AATAATAATA ATTACTTTTT CTATTCAAAC CTCGGGCAAC CCCTTTGGTA 000560 000561 ATATCAGAAG TAGTATCTAA AATAGATAAA TTGGATTTGT GTCTTAAACT CTTGGTTGTT CAGGTGGGAG TGGTTCAATA 000640 000641 AATGATGCAG ACTTCCTGTA GTAACTCTAT TTGAGGAGTC TTATTAACTT ATCCTATTAG AAATATTTCT TTTTATTAAT 000720 000721 ATATGTAATC TCGAAGTTTT CTTAACCTTT ATAGCCAGCA TTTGGAGACT GAGGAGAAAT CACTATTTGA AGTTCTAAGA 000800 000801 ACCGATGGAA CTCCTGTATT TTGAGAGTTT ATTTAGAACA TGTTAACCTA AGTAATGCTG TACTTGTTTT AGTTATTCCT 000880 000881 TTATATTTTT AAAATGATTT TCTTAGTATC AAATTAATAT GTTTCTAAAA AAATTAGAAA TAACTAGTAA GCCAGAAata 000960 000961 atttcaacat ccatggtaca cactgtaaat accttggtgt atctttccag gtggttttat gtatgcttat ttgtgtatat 001040 001041 atacacttat tttttacaaa aatgggatca tactgtacct tcagttttgt agcctgctta aagaaataac caaatcagaa 001120 001121 acatcttttt ttaatcaata aatattttct gttgtattaa atggttgcat tgtatggatg taccatcatt tattcaacta 001200 001201 gtcttctaga tgtgacatat agaagctgtt cttgattttt cattataaaa atatttttaa tgaa |
Predicted Small Protein
Name | NONHSAT077432_smProtein_1022:1108 |
Length | 29 |
Molecular weight | 3295.0754 |
Aromaticity | 0.214285714286 |
Instability index | 55.8964285714 |
Isoelectric point | 9.02069091797 |
Runs | 6 |
Runs residual | 0.0110663983903 |
Runs probability | 0.0860566448803 |
Amino acid sequence | MLICVYIHLFFTKMGSYCTFSFVACLKK |
Secondary structure | LEEEEEHHHHHLLLLLHHHHHHHHHLLL |
PRMN | HHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | i??????????????????????????? |