NONHSAT078296
Revision as of 23:52, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078296 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
511 nt |
Genomic location |
chr20+:5039923..5040433 |
Exon number |
1 |
Exons |
5039923..5040433 |
Genome context |
|
Sequence |
000001 CCAACCCCAG TTCTCCTTTA TGGAAGTAAT CAGGCTTACC AATTTCCTGT GTCTCCTTCC AAAAAAAATT CTCAACAACA 000080
000081 AATACACATT TATATACATG AGTCTGTTGT ATATAGCACA TGTTGtatat agtacctaga aaaatgcaaa aaaaacttgt 000160 000161 atgtaaggtt taaaaaataa ctcattaata cccagttgaa ggaatagaag tgagaagatc cctccccaaa gcccctgtct 000240 000241 gtgcctccct gaacatagcc agcttattcc taaacatgct catgattctg actttagtga tagccatatc cttgccttta 000320 000321 ttttatcctt gcctttattt tatttttgtt tttgagagag tgtctcagtg ttgcccaggc tggagtgcag tggcttgatc 000400 000401 atggctcact gcagcctcaa cccccactca gggatcctcc cactcagcct ccagagtagc tgggaccata gcaccacttc 000480 000481 cagctaattt tttttttttt tttttttttt t |
Predicted Small Protein
Name | NONHSAT078296_smProtein_275:397 |
Length | 41 |
Molecular weight | 4556.5828 |
Aromaticity | 0.175 |
Instability index | 44.37525 |
Isoelectric point | 5.74566650391 |
Runs | 6 |
Runs residual | 0.0280241935484 |
Runs probability | 0.125772831655 |
Amino acid sequence | MLMILTLVIAISLPLFYPCLYFIFVFERVSQCCPGWSAVA |
Secondary structure | LHHHHHHHHHHHLLLLLLLEEEEEEEHHHHHLLLLLLLLL |
PRMN | LHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | i??????????????????????????????????????? |