NONHSAT079452
Revision as of 23:57, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079452 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS),sense |
Length |
827 nt |
Genomic location |
chr20-:33284945..33302960 |
Exon number |
3 |
Exons |
33284945..33285050,33286499..33286652,33302394..33302960 |
Genome context |
|
Sequence |
000001 AGGACTGTTG AGCCCTTTTG GTGTTGCGAG TTGAAGTTCA AGGTTTCTAA AATGTTGTCT TGTATTGAAA GGAGCTAATG 000080
000081 CCATTATAAA TGTTACTAGT TTTCACATTT CCTAAGCAGC CTAGAGTACA GGGTGAGCAT TTTTAGATCT CCTAATGATG 000160 000161 TATTGTGCCG TGGAAGTACT GTGTGTGAAT AGCAGTAGTG GGGGCAAAAG CAATCTTCTC ATTTGGAAAT GTTGTAAATA 000240 000241 ATTTTATTAT ATAGTGTTTT GGATGTATTT GTTGTAGAAA TGGACCAGTG AATAAAGAGA ATCTAAGGAT TTGTACAATG 000320 000321 TGAAATAACG TGTTAAATAA ATGTCATTGT CATAGAACAT AAAGTTATGT TATTGGTAAG GGATTTTTGG GTGATCAGCT 000400 000401 CTTTCTTTGG ACCTTAACTA AGCAGACACA GCCTTGTGGA TGGAATTCCT ATCTAGTCCT CATTGAACCT GAGATGCCCG 000480 000481 CCTGGCAAGT TGAGGAAAAT GTACATACTT GCTCCCTCAC CTCATTCTTG GCTTTGAAGA AACTAGCCCT GTTCAGCACT 000560 000561 GTGCCAGttt ccccatctgc agaatggctg gctccatgct cccttaacat acctcccagT CTCAACCTCA AGGCATCGTG 000640 000641 GTTTGTTTGT GTGAACTGCG CTTAATGGCC CTGTCAGCAA GGAGGTGATG ATCAGGACAG GATTCACTTC AGAGAGAAGA 000720 000721 GCAGCTGGTG CTCCCATGAA GGACCAAATG CTATGtgtgg agagggccac aagaggagga cccaagaggg acctctacaa 000800 000801 gctgagagtt gagagtggtc ccctgcc |
Predicted Small Protein
Name | NONHSAT079452_smProtein_473:664 |
Length | 64 |
Molecular weight | 6862.0004 |
Aromaticity | 0.0952380952381 |
Instability index | 47.1682539683 |
Isoelectric point | 6.50628662109 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0300496575006 |
Amino acid sequence | MPAWQVEENVHTCSLTSFLALKKLALFSTVPVSPSAEWLAPCSLNIPPSLNLKASWFVCV NCA |
Secondary structure | LLLHHHLLLLLLLLHHHHHHHHHHHHHLLLLLLLLHHHLLLLLLLLLLLLLLLLLEEEEE ELL |
PRMN | - |
PiMo | - |