NONHSAT079715
Revision as of 23:58, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079715 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
911 nt |
Genomic location |
chr20-:37957657..37958567 |
Exon number |
1 |
Exons |
37957657..37958567 |
Genome context |
|
Sequence |
000001 ATCCAGAATT GATTAATATG GTGAAGGAAA GGCATTAGAA GTAACTGAAT ACCTGACCTA ATTCTCAAGG AATCAGTTTA 000080
000081 AGGAAACAGC TGTTACCACC CCAAAAGAGT TTATGGCAGC TGGAGATCAC TTAGCTGTCC ACTGCCCGAC ACAGCAATGG 000160 000161 GCTACAGGGG AAGAACTGAA AAGAGAGGCA TAGCTACCAA CAGGCAAATA ATTTTTGGTA GCCAAAAATG TGGCATGCTA 000240 000241 CATCCAGTCA AAACAGATGG CATATTCAGG TGAATTGGAA GCTATCACTG AAGATGATGG TGGTAGGGCC TGGGTAGATA 000320 000321 CACATCACAG CACAGGAATT GCAGGAATAA ACAAATAGGT TGAGGAGATT ATACTTACAA GCAAAAATGG TATAAAACTC 000400 000401 GAAAACTGCT CAGTCTTATG AGAGGAAGAA GAAAAAGATG AAGGAAAATC TACATTTATG GAATAATATG AAGAGAGTGG 000480 000481 GTTGCTGGAA GCAGATAAAG CTACCCTAGA TGAAAGGAAA ATAGAAGAAG CTTGTAAAGC TTAAAGTGAT GTTGGAGGTG 000560 000561 AAGATGCTCT TTTGCAAACC AAAACTTGTG ACCTTTACAT CACATATGGT AAATATTACC AGATGGCACA ACTATGGTTT 000640 000641 TTTGGCTATG ATGAGGAACA GCAGATTTTC ACAGCTGAAC ACATGTATAA AGACATCATT CAAGACCATG TGAAGAAAAC 000720 000721 AGTGACCACT GAAAATCCCT CCACCAATCT CCCTCCACCT CCTATGAGAT AATGGAGAAA ATCATTAAGA CTACTGCAGA 000800 000801 AAAAAGGGGA GAACATTTGG TGTTCACGTG TATCTTCTAA TTTTCTTGAA ATATGTGCAC ACTGTCATTC CAACCACAGC 000880 000881 ATATGACCAT AAAAGACACT TCACAATGTA A |
Predicted Small Protein
Name | NONHSAT079715_smProtein_548:712 |
Length | 55 |
Molecular weight | 6463.7532 |
Aromaticity | 0.12962962963 |
Instability index | 40.5666666667 |
Isoelectric point | 10.3119506836 |
Runs | 11 |
Runs residual | 0.0410117434508 |
Runs probability | 0.0385893915307 |
Amino acid sequence | MLEVKMLFCKPKLVTFTSHMVNITRWHNYGFLAMMRNSRFSQLNTCIKTSFKTM |
Secondary structure | LEEEEEEEELLLEEEEELLLHHHHHHHHHHHHHHHHHLLLHHHHHLHHHHHLLL |
PRMN | - |
PiMo | - |