NONHSAT080409
Revision as of 00:01, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080409 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
468 nt |
Genomic location |
chr20+:52518906..52519373 |
Exon number |
1 |
Exons |
52518906..52519373 |
Genome context |
|
Sequence |
000001 AAAAGAATCC TTATGGCAGC ATGGCTGGTC ATGGTGATCA CCTGGATATG CACAAAATGG CCAACAAGGA GAatgggttc 000080
000081 tgggttgggt atgtgttcca agtatagcca gagagattct tgcctgggac tttcgtgaga gctattggga aaaaggggtg 000160 000161 tgtgtgtgtg tgtgtgtgtg tgtgtgtatg tgtgtgtgtg tgtgtgtgtg tgtgtttctt ttggtttctt ttggagccac 000240 000241 cagttgtggg gaccatctag gcctgaagct acagatgatt gctttgccat tcacatggag acagcctact tgaaagtaat 000320 000321 ggcaatatag aggaaagcag agccaagaaa tagagaatga cacattcttg ataacgcttc tcgccgcctg gatccagcat 000400 000401 gcctgaagtc agcagtaaac ttggatgctt cagttacaag tgctaagttc cctttcattc tttttttt |
Predicted Small Protein
Name | NONHSAT080409_smProtein_20:106 |
Length | 29 |
Molecular weight | 3219.6313 |
Aromaticity | 0.142857142857 |
Instability index | 46.6107142857 |
Isoelectric point | 6.21246337891 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0360007065889 |
Amino acid sequence | MAGHGDHLDMHKMANKENGFWVGYVFQV |
Secondary structure | LLLLLLHHHHHHHHHHLLLEEEEEEEEL |
PRMN | - |
PiMo | - |