NONHSAT081745
Revision as of 00:07, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081745 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
733 nt |
Genomic location |
chr21+:34144485..34169756 |
Exon number |
3 |
Exons |
34144485..34144619,34160923..34161012,34169249..34169756 |
Genome context |
|
Sequence |
000001 GCGGTAATGT GAGGAAGCCT CCCGCCAAAC AGATGAGGGA GGAGGAGGAG GGGAGAGGCC AGAGAGAGAA GCGGCTTTCG 000080
000081 GGAAGGAAAG TGTGATCTAG TAGGTGGAAT AGTCCTCTCC AAACTTTGAC CTGAGGCCTT AAATTCCACA ACCTCATCAT 000160 000161 CTACCACCTT TGGTGCTTTC AGAATCATGA CTCTCAATGT TGAAGAATGG GCTACTGCAT GGAAGGTGCT GATCCTTTTA 000240 000241 GAGGCAGCCG TGGAAGAGGA AAAGAGATCA GAAGAGAAAA GGATATTGGT TTGCGGAACA TGTGGGACAA GAAGTTCCCA 000320 000321 GAAGAATTTG TGAGCAACTT CCCGACAGTA AGGCCCTGGC TAGACCTCAG GATGGTCCCT GCCTCCTGGA CATTAGGAAG 000400 000401 CCCAAAGGCC AGAACAAAAA CACATGCCTA GTGGGGGAAG GCTCACTAAG AGGGCACCAA GTGGGGCAAA TACCCCTGGT 000480 000481 AACCCATTTA TGGAGGCTGC CACAGAAATG CTAGTTGGAA ATTTTCCTCC TTCAGTCTAT CATGAAtttc ttttttctct 000560 000561 tttgagatga agtcgcccgg gctgcagttc agtggtgcaa tctcagctca ctgcaagctc tgcctcccag gttccaacga 000640 000641 ttgtcttgtc tcagcctcct gagtagctga gattataagc acgcaccatc atacccgact aatttttgta tttatagtag 000720 000721 aaatggggtt ttg |
Predicted Small Protein
Name | NONHSAT081745_smProtein_206:430 |
Length | 75 |
Molecular weight | 8597.8348 |
Aromaticity | 0.108108108108 |
Instability index | 50.4351351351 |
Isoelectric point | 10.1139526367 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0203046183438 |
Amino acid sequence | MGYCMEGADPFRGSRGRGKEIRREKDIGLRNMWDKKFPEEFVSNFPTVRPWLDLRMVPAS WTLGSPKARTKTHA |
Secondary structure | LLEEELLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLHHHHLLLLLLLLLLLLLEEELL LLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |