NONHSAT082075
Revision as of 00:09, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT082075 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
606 nt |
Genomic location |
chr21+:39493567..39528605 |
Exon number |
4 |
Exons |
39493567..39493695,39494406..39494577,39526527..39526623,39528398..39528605 |
Genome context |
|
Sequence |
000001 accccaccct aatcttgtta tgcaaatagg cttcccactt ggcaggggcc gtcttgtcca ctcgtttctg taaacatggg 000080
000081 tggcaaaaag agaagatgga gctgccattt agaacatgcc taatcccagC TTCATCTTGC TGAGCAAAAA TGAAGGAGCC 000160 000161 TGGACCCAAC TTTGTTACTG TGAGAAAGGG TCttcattca ttcaagatgg catttgttaa gcacctactg tgAGTAGATG 000240 000241 ATCTCCTGTC AAAGACAGTT AACAAATCCT CGGAATATTG CTTCATGTAC AGTTATTGGA Ggctggagtg cagtggttca 000320 000321 atcacggatc actgcagcct ccacctccca gttcaagaaa ttctcatgtc tcagcctcct gagcagctag gattacagAC 000400 000401 AAACCTTGGA AATCAAGAAA GTTCTGGAAT GATGAAGCTG TTCATGCCAA GACCGAAAGT GCTGGCCCAG TATGAGTCCA 000480 000481 TTCAGTTCAT GCCGTGACAA TTTTCTTGGA ACTCCTTTTT ATTGTTAGTT CTCACTTGTT TCCATATTTA GTGAATGTAC 000560 000561 ATTTAATTGC AAAGCTGTCA TTAATAAAAA TTCTTATAGT ACCTCA |
Predicted Small Protein
Name | NONHSAT082075_smProtein_284:496 |
Length | 71 |
Molecular weight | 8047.2695 |
Aromaticity | 0.0857142857143 |
Instability index | 70.9442857143 |
Isoelectric point | 5.46112060547 |
Runs | 10 |
Runs residual | 0.0019801980198 |
Runs probability | 0.0342518989579 |
Amino acid sequence | MYSYWRLECSGSITDHCSLHLPVQEILMSQPPEQLGLQTNLGNQESSGMMKLFMPRPKVL AQYESIQFMP |
Secondary structure | LLLEEEEELLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLHHHHEEELLLHHHH HHHHHHHLLL |
PRMN | - |
PiMo | - |