NONHSAT082208
Revision as of 00:09, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082208 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
482 nt |
Genomic location |
chr21+:41086098..41098875 |
Exon number |
3 |
Exons |
41086098..41086146,41097765..41098012,41098691..41098875 |
Genome context |
|
Sequence |
000001 agaaaaagtt ctacatgggc tcagcagctg tgcttgggac tacacttagA GATCAAGTTA AAGAATAATC CTTGGTAAAT 000080
000081 CTTGGCTGCG GGTGACTGAT GGAAGTTTCA GAGGCTGGAC TGGAAGATGA AACTGGGGCA AGATGTTACA CAGCATGGCC 000160 000161 TCAGGAACCT GAGCTCCAGC AACCTGCGGG TCCCAATGGA GGCGAAGTCA AGGAGCGTCT CAGAGAGTGG TTGATGTGTG 000240 000241 AAGTCTCTGT CTGCCCATCT GAATAACAAG AGATGGGGCT TGTGATTTTC CTCCACGgca cccctacctg agggcctcca 000320 000321 ggaggaatga catctcaaac agaaacctgc ataacatcag cccaaaccaa ggacccattt tatcatcaaa gaggtgtgcc 000400 000401 atgaatgcat gactgtggga tccactgctt tgaccacata tggatgactt ggaagctgcc agcctacatg aacaatggaa 000480 000481 ag |
Predicted Small Protein
Name | NONHSAT082208_smProtein_98:265 |
Length | 56 |
Molecular weight | 6123.7282 |
Aromaticity | 0.0545454545455 |
Instability index | 53.4236363636 |
Isoelectric point | 4.23406982422 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0411588058648 |
Amino acid sequence | MEVSEAGLEDETGARCYTAWPQEPELQQPAGPNGGEVKERLREWLMCEVSVCPSE |
Secondary structure | LEELLLLLLLLLLLEEELLLLLLLLLLLLLLLLLHHHHHHHHHHHEEEEEELLLL |
PRMN | - |
PiMo | - |