NONHSAT082652

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT082652

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1406 nt

Genomic location

chr21+:45905454..45911022

Exon number

2

Exons

45905454..45906113,45910277..45911022

Genome context

Sequence
000001 AGAAACTGCT GGATGCTGAG AGGAACGCAT CAGTGGAAGA AAACAAGCGG CTGGACGTGG AGAGGACGTC AAGGGAGCAT 000080
000081 GCCGGCGGAA GAGCACACCA CAGACGCCGG CAGGCCACCG AGCGGCAGGA CCAGGCGGAG TTTGGCCGGG GCAGTCGGAG 000160
000161 GAGAGCTAGG CCACTAAGCA GCTCAACTCC AGGAGATAAA CCATCTCCCT TGTGGCTCCT CCGTCGGCTG AGAGCTGCTT 000240
000241 CCACTCAATA ACACTTTGCA CTCGTTCTCC AAGCCCCCGT GTGATCCGAT TCTTCTGGTA CACCCAGGCA AGAACCCAGG 000320
000321 ATACAGAAAG GCCTCGGTCC TTTCCACAAG TACCTCTACT TGAGGTACTC ATTGACCTGG TTAACACAAG CTGCCTACAG 000400
000401 ACGCCAAAAC TAAGGGCACC CTGGAACACA GGCTTCAACT GTAAACATTC ACCCCTGGGC ACTGCCGTGG GGTGGGAGCC 000480
000481 TGCCTGAGTG TATGCTCCCC TAGAGGTTTG AGCTGCGGGG CACTGAAGAA GTGAGCCACA CTCCCATCGC ACACTGCGAG 000560
000561 GGGGACAAAG GAACTTTTCC TCTTTTAACT GGGGCCTCAT CTGGAATCTC GGAAGGTGAA TGTCTGCCTT CGAAAACCCT 000640
000641 ACCACCTGTC TTTCTTGTGG ATCACCCTGG CCTGCCATGC CCCCATCCTG GGCCTATAAA AACCCTGAGA CCCTAGCAAG 000720
000721 GCAGAGATAG AAGCTGCCGG ATGCTGAGAG AAACACATCA GTGGAAGGGA AGAAGAAAAG CGGCTGGACA TGGAGAGGAC 000800
000801 GTCAGTGGAG CATGCCGGCG GAAGAGCACA CCCACAGACC CTGGCACGCC GGCAGGCCAC GTAGCGGCAG GCCACGTAGC 000880
000881 GGCAGGCCAC GTAGCGGCAG GCCACGTAGC GGCAGGCCAA GGCGGAGTTT GGCCGGGGCA GTCGGAGGAG AGCTAGGCCA 000960
000961 CTAAGCAGCT CAACTCCAGG AGAAAACCAT CTCCCTTCTG GCTCCTCCAT CAGCTGAGAG CTGCTTCCAC TCAATAACAC 001040
001041 TTCGCACTGA TTCTCCAAGC CCAGGTGTGA TCCGATTCTT CTGGTACACC CAGGCAAGAA CCCAGGATAC AGACAGCCCT 001120
001121 CTGTCCTTTT GATAACTAGA GGGTCTCATT GACCTGGTTA ACACAAGCTG CCTACAGACG GCAAAACTAA AAGAGCACCC 001200
001201 TGGAACACAC GCCCACTGGG GCTTCAGCTG TAAACATTCA CCCCTAGACA CGGCTATGGG GTTGGAGCCT GCCTGTCTGT 001280
001281 ATGCTCCCCT AGAGGTTTGG GCAGCAGGGC ACTGAAGAAT CAAGCCACAC CCCCATCGCA CACCCTGCGA GGGGGACAAG 001360
001361 GGAACCTTTC TCTTTTCAGT TGGTCTTAAT AAACACTGAG TAAATG
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Predicted Small Protein

Name NONHSAT082652_smProtein_740:955
Length 72
Molecular weight 7187.8045
Aromaticity 0.0281690140845
Instability index 52.1549295775
Isoelectric point 9.18463134766
Runs 7
Runs residual 0.0499629355078
Runs probability 0.0183082241906
Amino acid sequence MLRETHQWKGRRKAAGHGEDVSGACRRKSTPTDPGTPAGHVAAGHVAAGHVAAGHVAAGQ
GGVWPGQSEES
Secondary structure LLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLEELLLL
LLLLLLLLLLL
PRMN -
PiMo -