NONHSAT083082
Revision as of 00:12, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT083082 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
685 nt |
Genomic location |
chr22-:16100517..16124973 |
Exon number |
4 |
Exons |
16100517..16100648,16101276..16101474,16118792..16118913,16124742..16124973 |
Genome context |
|
Sequence |
000001 CTGGTTGGTG GAGAATTTGA ACTGGAGATG AACTCTATTA TCCAGGATGC TGAGAGTATA ATACGCATGA CAGAGCTTTT 000080
000081 AGAGCACTGT GATGTAACAT GTCAAGCAGA AATAGGGAGC ATGTTTACAG CCATTCTATG AAAAAGTGTT TGGAATGTAC 000160 000161 AGACTAGCAC AGAAGTTGGG CTAATTAAAC AAGTATTGCT GAAAATGAGT GCTGTAGATG ACATGAGAGC AGTTTTCATG 000240 000241 CTAGCAAAGG AGTTGGTTAC TCTGCTCATT TTGTTGGCAA CTGTTTTATA GTCACATCAT CGAAGTCCAA AGGAAAATGT 000320 000321 TTTCAGCATT GTGTGAAATA TGATTTTCAA CCACAGTACC TTCAAGTTTA AATCTAAGAG TGATATTCAT TTGGCAGAAC 000400 000401 ATCATAAACA GGTTTTATAT GATGGGAAAC TTGCAAGTAG CATTGCCTTT ACATATAATT GCTAGGGCCA CTGATACTCA 000480 000481 ACTCTGCCTG GAATCATCAC CAAAAGAGGA TGCATCAATT TTTGTGCATT CCCAACATGC TCTAATGCTT CCGGATGTGA 000560 000561 AAGGGATAGT AACACATTCA ATTCATAGTG CAATTCATTC AATTGGACAG ATTCAAGTGC TTTTTCCACT GTTTCCCCAG 000640 000641 TTGGATAATT GGCAGCTCAA TGACAGTCAA GTGGAAACAA CTGTC |
Predicted Small Protein
Name | NONHSAT083082_smProtein_98:166 |
Length | 23 |
Molecular weight | 2641.9806 |
Aromaticity | 0.0454545454545 |
Instability index | 89.3272727273 |
Isoelectric point | 7.84747314453 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0361420243774 |
Amino acid sequence | MSSRNREHVYSHSMKKCLECTD |
Secondary structure | LLLLLLLLEEELLLHHHHHLLL |
PRMN | - |
PiMo | - |