NONHSAT083371
Revision as of 00:13, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083371 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1272 nt |
Genomic location |
chr22+:19014309..19015512 |
Exon number |
2 |
Exons |
19014309..19015497,19015503..19015512 |
Genome context |
|
Sequence |
000001 GTTGAGTTCT TGGCACAGCT GAAGATCATG GACTACAGCC TGCTGGTGGG CATCCAGACG GACCGGGCAG AGAGGAGGAG 000080
000081 ATGGAGAGCA GACCTGTGTG CGCGCCCCGT CTGCCACGTT CCCTGAGGAC ACACTGCTTT GACCAGCCCC CACCCCATCT 000160 000161 CCTCTCCGCC AGTCCCCGGT GTCCACCCCA GCCCCGCTAC CGATGAAGCT CAAGCCAGGG TCCCCATCAC CTGCTTCACG 000240 000241 GCCATCCCTG CACTTGAGCT CAGGGGCTCA GGGTTGTGCT GACACGCCTG CCTGTCCACC CCTCACCGAC ACCTCTGCAG 000320 000321 TCCTCCTCAG GGCCCAACAG GACCCCCAGG ACCCCGCTCC CATTCTGCCC TTGCTCCTGC CAACCTGTCT TCTCTATGCC 000400 000401 CATGACTTTG GAACCCTCTG CCACAAGTGC CAGCCCCCAC ATCTGTAGCC CCTGCAGGAA CAAGCCCTAA TCTGGACTCA 000480 000481 TTGCAATGGC TCAGCTTCTC TTCCAACCTG TCCATAAACC TCCAGGCAGA GATCACAAAA CTAACAGCTC TTTCTGCAAA 000560 000561 TCTGGACTCT CTCCTGCACC TTCTTCACCG TCCAGGCCTC CCTGTCATCC GTCCTGGGGA CCTCAGAGAT CTCTTCATTT 000640 000641 CACAGGTGAA GACTTGGCTC AGAGAGGGCA GAGCCCCTGG GTCACACAGC CCGTCTCCAG TAGGGCTGGG GAAAAGAACC 000720 000721 CAGGGCTCTC TTGTTGGCAG TGTTTTAATG ACTGGGGGGA GGGAGAGAAT GGCTAATGAG GCTCTAGGGA TCAGCACAGC 000800 000801 CAGCTGCTGG AGGTCCCAGA GGACGGGTGA CTCAGCAGGA ATGGGGGAGT CTGAGGGGTT GACAGAGTGC CCAATTCTCA 000880 000881 CCTCCTCCTG CACCTTCCAG AGAGACGGGC TGCAGGGAGT GATTGAGTGG ATGAACATGA CTAGAGGGAC CCAGTCTTCT 000960 000961 CCTCAGCAGC TGCTTGAGGA CAGTATTAGC GGTCCCCTCA ATCCCCCCCA CCCACACATG CACACATGCA CTGACCTGCA 001040 001041 GGGGCCAGAT CCCGGTGGAC CCGGACACAG CTTCCAGGGG CTGTCTTGCC ATGTCCCTTC CCAGATCTGC CTGGATTCAT 001120 001121 GCCAGGCCAC CCTCCACAAT TTGCTGAGGG AGGCCCCAGA GTCCAGGGCA CCCAGAGTGC TAACTAGCCC CTGGGGGTAC 001200 001201 AGGGAGAACA GCATGCTGTG TGGGGGATAC TACTCTCTGC CCATACCTAG GGCCTGTGCG CGCACAGGCA GC |
Predicted Small Protein
Name | NONHSAT083371_smProtein_485:775 |
Length | 97 |
Molecular weight | 10481.503 |
Aromaticity | 0.0833333333333 |
Instability index | 69.284375 |
Isoelectric point | 8.47930908203 |
Runs | 11 |
Runs residual | 0.0196520618557 |
Runs probability | 0.0460487225194 |
Amino acid sequence | MAQLLFQPVHKPPGRDHKTNSSFCKSGLSPAPSSPSRPPCHPSWGPQRSLHFTGEDLAQR GQSPWVTQPVSSRAGEKNPGLSCWQCFNDWGEGENG |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLHHHHHHL LLLLEEELLLLLLLLLLLLLLLEEEEELLLLLLLLL |
PRMN | - |
PiMo | - |