NONHSAT083371

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT083371

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1272 nt

Genomic location

chr22+:19014309..19015512

Exon number

2

Exons

19014309..19015497,19015503..19015512

Genome context

Sequence
000001 GTTGAGTTCT TGGCACAGCT GAAGATCATG GACTACAGCC TGCTGGTGGG CATCCAGACG GACCGGGCAG AGAGGAGGAG 000080
000081 ATGGAGAGCA GACCTGTGTG CGCGCCCCGT CTGCCACGTT CCCTGAGGAC ACACTGCTTT GACCAGCCCC CACCCCATCT 000160
000161 CCTCTCCGCC AGTCCCCGGT GTCCACCCCA GCCCCGCTAC CGATGAAGCT CAAGCCAGGG TCCCCATCAC CTGCTTCACG 000240
000241 GCCATCCCTG CACTTGAGCT CAGGGGCTCA GGGTTGTGCT GACACGCCTG CCTGTCCACC CCTCACCGAC ACCTCTGCAG 000320
000321 TCCTCCTCAG GGCCCAACAG GACCCCCAGG ACCCCGCTCC CATTCTGCCC TTGCTCCTGC CAACCTGTCT TCTCTATGCC 000400
000401 CATGACTTTG GAACCCTCTG CCACAAGTGC CAGCCCCCAC ATCTGTAGCC CCTGCAGGAA CAAGCCCTAA TCTGGACTCA 000480
000481 TTGCAATGGC TCAGCTTCTC TTCCAACCTG TCCATAAACC TCCAGGCAGA GATCACAAAA CTAACAGCTC TTTCTGCAAA 000560
000561 TCTGGACTCT CTCCTGCACC TTCTTCACCG TCCAGGCCTC CCTGTCATCC GTCCTGGGGA CCTCAGAGAT CTCTTCATTT 000640
000641 CACAGGTGAA GACTTGGCTC AGAGAGGGCA GAGCCCCTGG GTCACACAGC CCGTCTCCAG TAGGGCTGGG GAAAAGAACC 000720
000721 CAGGGCTCTC TTGTTGGCAG TGTTTTAATG ACTGGGGGGA GGGAGAGAAT GGCTAATGAG GCTCTAGGGA TCAGCACAGC 000800
000801 CAGCTGCTGG AGGTCCCAGA GGACGGGTGA CTCAGCAGGA ATGGGGGAGT CTGAGGGGTT GACAGAGTGC CCAATTCTCA 000880
000881 CCTCCTCCTG CACCTTCCAG AGAGACGGGC TGCAGGGAGT GATTGAGTGG ATGAACATGA CTAGAGGGAC CCAGTCTTCT 000960
000961 CCTCAGCAGC TGCTTGAGGA CAGTATTAGC GGTCCCCTCA ATCCCCCCCA CCCACACATG CACACATGCA CTGACCTGCA 001040
001041 GGGGCCAGAT CCCGGTGGAC CCGGACACAG CTTCCAGGGG CTGTCTTGCC ATGTCCCTTC CCAGATCTGC CTGGATTCAT 001120
001121 GCCAGGCCAC CCTCCACAAT TTGCTGAGGG AGGCCCCAGA GTCCAGGGCA CCCAGAGTGC TAACTAGCCC CTGGGGGTAC 001200
001201 AGGGAGAACA GCATGCTGTG TGGGGGATAC TACTCTCTGC CCATACCTAG GGCCTGTGCG CGCACAGGCA GC
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Predicted Small Protein

Name NONHSAT083371_smProtein_485:775
Length 97
Molecular weight 10481.503
Aromaticity 0.0833333333333
Instability index 69.284375
Isoelectric point 8.47930908203
Runs 11
Runs residual 0.0196520618557
Runs probability 0.0460487225194
Amino acid sequence MAQLLFQPVHKPPGRDHKTNSSFCKSGLSPAPSSPSRPPCHPSWGPQRSLHFTGEDLAQR
GQSPWVTQPVSSRAGEKNPGLSCWQCFNDWGEGENG
Secondary structure LLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLHHHHHHL
LLLLEEELLLLLLLLLLLLLLLEEEEELLLLLLLLL
PRMN -
PiMo -