NONHSAT084642
Revision as of 00:17, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT084642 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
850 nt |
Genomic location |
chr22+:28393704..28395417 |
Exon number |
2 |
Exons |
28393704..28393727,28394592..28395417 |
Genome context |
|
Sequence |
000001 GACCACAGGC TGACACATCA TGAGGGCGGC GCTGGCTTTC AGGCCGTTCA GCAGGGATGA GTAGAAGGCA TGGATGAACA 000080
000081 TCTTAGAAGC AGCCACTGGC ACAGGCCACA GAGACACGAG GACACACTGA GCGCCGGCAG CCAGGAAGGC CCTTGTCAGC 000160 000161 GCGATGACCC CGTCGGCTGT GACTTTGCTG TTGGACTCCT GGGAGGAGCC AAGCACCACC AGCTTCACAG GCAGCTGCAG 000240 000241 GTCCAGGACG TCGGCGGCAG TAAGCAGCAG CTCCTGCAGG GGCGGGCAGT CCGAGATGCT CTCCCCATCA CTGGCATCGT 000320 000321 CCTGCACCCG CAAGGACTCA GGGATCGTGT AGGGGTGGCC GAAGGAGCTC TTGCTGCTGG CAGGGTTGCC GTCCATGCTG 000400 000401 GGCGTGAGGA CCAAGGCCGA CAGCTTCCAG GAGATGTGGG TGGCAAAGTG GACGCATTCA GCCTGGGTCA GGGCACTCAT 000480 000481 GACCCTCTCC TTGGTGGCCA CACTGCCCAC TAGGGGCTGG CAGCCCAGCA GCTCGGACAC CATGTAGGCC TCTTCCTCGG 000560 000561 CCGATGGCAT GGGCCCCCAC AGCCACCTGT CCATCACGGC CGATGGTAGC TTGGGGTTGC CGATGACAGC CGCCATGGAT 000640 000641 GTGGAGCTGG AGTATGTGGG CGGGTTCTTC CGTAAGTGAG ACTAGGAGGG GAGGGGACAA AGCAGACCAC CCGTCAGACA 000720 000721 GAACAGCCAG GCTGCCCGGC AGTGGTCGGC CGAGCACAGG GACGGCCAGC TCTCTGCTGG TTGAGCTTGA ATCCACCTGT 000800 000801 TTCCCCAGTC ACCACATTCA CTCTTATTTT TCAACATCTT TTTGACACAG |
Predicted Small Protein
Name | NONHSAT084642_smProtein_638:844 |
Length | 69 |
Molecular weight | 7429.0498 |
Aromaticity | 0.102941176471 |
Instability index | 46.7058823529 |
Isoelectric point | 6.89495849609 |
Runs | 10 |
Runs residual | 0.00655802861685 |
Runs probability | 0.0300476947536 |
Amino acid sequence | MWSWSMWAGSSVSETRRGGDKADHPSDRTARLPGSGRPSTGTASSLLVELESTCFPSHHI HSYFSTSF |
Secondary structure | LEEEEEELLLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLHHHEEEEEEEELLLLLLEE EEEEEELL |
PRMN | - |
PiMo | - |