NONHSAT084847
Revision as of 00:18, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084847 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
673 nt |
Genomic location |
chr22-:31500999..31501750 |
Exon number |
2 |
Exons |
31500999..31501114,31501194..31501750 |
Genome context |
|
Sequence |
000001 TGGGCTTCAG TGTCTCGTCT GTACCTCGAG TAGACTGAGG TCATGGTCTC TGATGCTCTG GTTCCTCCCC AGGTGAAGGC 000080
000081 TTTCGTCACG CAGGACATTC CATTCTAGTA TCCTTCTGTT CTGGGGGAGG GGAAATGGGA TGGGCACCTG GGAGAATCTC 000160 000161 CACGTAACTT CAGAAagggg tggcagatgg ttttcaactg acaagttgaa ttgattggta gtggctccca gaggattctg 000240 000241 aggtggtctc catgttgggt gggcaagaga gattgactag tgatgactgc cacagaatgg agaggagggC CCTTTACTTC 000320 000321 TTTGAACCCT AATTTTCTCA CGTATAAGCG GAGACCCTGG CCCCTCCCGG GCACAGAGTA AGCTCTGAGC AAAGGAGGCA 000400 000401 ATGCTGTTCC CATCAGTAAG GCTGCGGAAA CCACCACCTC CCTCTGCCCA CCACCCCGCT CCTTAACACC ACCTCCAGTC 000480 000481 ACAACCTGGT GATGAAACAC CTCCCTGGGG CCGACCCTGA GCTCGTGCTG CTGGGCCGCC GCTACGAGGA ACTAGAGCGC 000560 000561 ATCCCACTCA GTGAAATGAC CCGCGAAGAG ATCAATGCGC TAGTGCAGGA GCTCGGCTTC TACCGCAAGG CGGCGCCCGA 000640 000641 CGCGCAGGTG CCCCCCGAGT ACGTGTGGGC GCC |
Predicted Small Protein
Name | NONHSAT084847_smProtein_251:331 |
Length | 27 |
Molecular weight | 3158.5488 |
Aromaticity | 0.115384615385 |
Instability index | 63.7461538462 |
Isoelectric point | 5.53839111328 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.036742624978 |
Amino acid sequence | MLGGQERLTSDDCHRMERRALYFFEP |
Secondary structure | LLLLEELLLLLHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |