NONHSAT087160

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT087160

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1093 nt

Genomic location

chr22+:44883672..44887538

Exon number

2

Exons

44883672..44884461,44887236..44887538

Genome context

Sequence
000001 tgcagtgagc caagattatg ctactgcaAG AATCTTCCTC TATGTGGTCT GGTGACTGTC GCAATGCTAT TTTGTCCTAC 000080
000081 GTGCTTTGTT TGTTTCTGCA GCTGTCTCCT GCAGGGCATC TCTCCTTCCT GGACTGGGGT CTGTGTGTCT ATGTGTTGTG 000160
000161 GTTCCCTGGT TGTATCCACC CTGGTCCTCC AGGGCACACA GGGTGAAGAA GCTCTGTCTT CAGAGCACTG TGCACACCAC 000240
000241 TCGTGCCATG CAGGATGCAC CCTGGACTCA TGTCAATGAC TAGCTTCTGT CCCTGGCCAT GGGGGACCAT TTTCTGGCCA 000320
000321 CAAATCCTGG CAAGATTTCC AGCCCCCACC CATGGGCAGA CGGCACGTGG TTCCCAGTTA TCGCTTGCAT TTTAGTTTCG 000400
000401 GGGAGATGTT TTCACTTCTG GTCCATAGAA ATGTCCTTTC ATTATTTTCA AATGCTCCAT TCATACAGCT CTTGTGTGTG 000480
000481 TCTGTGTGTG TGGTGTTATT GATGTTTTCA CTTCGAGTGC ATGGACTTGA AGAGGGAGGT TTCTGTATAA ACTCAATCTt 000560
000561 gacctagaaa attgtcttca gcactccaag ccgattttct catctgtcaa gtggggctgt tatgaggatg aactgagata 000640
000641 gactcatcag caagtagcac agtcgaccac agagggaaca cccaTGGAGC CCATCGAGTC TGCTTTCTGT TAGTGCTGGG 000720
000721 AGCAGGACGA GGGTGTCACC CATCAGTCCC GGCAACAGCA GTGCTGGGGA AGTTCCACAA GTGACCTAAG aaaaaaaaaa 000800
000801 aaaaaaaaaa aTTATAAAAC CCAAGTCAGC TAAAATAGGG AAGTACTGGG CAAGACAAAT GGATCAACTG AATAAACAGT 000880
000881 GGGAAAGTTG GTCCTACGGT AGATAAGATT TCCCTGCGTG TGAAGGAAAG AACACACGTG ACCAAGGGAG AGAAATACTT 000960
000961 ATTAATAACT GGACTCAGGG TATTTAAATC TTTGAAAGAC AGTCTATTTA GAGCCTCCTC TCACATTACA TGCCAAATTA 001040
001041 ATCCCAGAAA TAACTGTGTA TTAATCTAGA GGGGGAAGAA AGACCTGAAG TTT
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Predicted Small Protein

Name NONHSAT087160_smProtein_17:205
Length 63
Molecular weight 6822.9075
Aromaticity 0.129032258065
Instability index 56.0451612903
Isoelectric point 5.71136474609
Runs 7
Runs residual 0.0407373271889
Runs probability 0.0552653493831
Amino acid sequence MLLQESSSMWSGDCRNAILSYVLCLFLQLSPAGHLSFLDWGLCVYVLWFPGCIHPGPPGH
TG
Secondary structure LLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLHHHLLLLLEEEEEELLLLLLLLLLLL
LL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
LL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooooooooooooo
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