NONHSAT087174
Revision as of 00:22, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087174 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
755 nt |
Genomic location |
chr22+:44965220..44968329 |
Exon number |
4 |
Exons |
44965220..44965321,44966380..44966504,44967256..44967372,44967919..44968329 |
Genome context |
|
Sequence |
000001 GACAGGCGAT GGAGACGGGG ATCAGATGGG AGGGTGACCT GGTGAGAGAT TTTCCAGCTG GCAGAAATGT CCTCTACCTT 000080
000081 GAGGGAGGCG TGTGACATGG GAGTTCTGTT TAAAGAGGAG AATGGATGGT TACACATCCT GCTTGGGATC CAATCACTGA 000160 000161 ACCAGAGGGG AACACCGTGC ATGATGGGCT GGTAAGGCGT GGGGGTCAGT ACAGCATGAC ACAGAAGCCC TACCCACTTT 000240 000241 ACGGATGAGG AAATGGAGGC TCGGGAGATG AAGCTGGCAG ACTTCCTCTG GAACTTCCTC TGGACATCTG GAGGGACGTC 000320 000321 CTGTCAGCAG AGCAGGCTGG ACTGCTTCAC AAAGAGGATG CAGCCCCACC TCCCAGCGGG AGTCAGTTCT GCTCTGAGAC 000400 000401 GTGAGGCTCA GAATCAGATG AAGACTCCTG CTGCTGCATC TTGAAGATAA TGATGCTGTT GCTCCCGGCT GGAACCACAG 000480 000481 CAGTGGCGAT GAGTGAACAG CCAGCAGAGT GGAGCGGCCA CACTGATACA GGTGAGGCTC CAGCACTGCC GCAGCCCAGG 000560 000561 GCCAGGCAAA ACCGCCTTCC TATCCCCCGG GAGCCGAGGC CTCCGAGATC GGCGCTGGGA GGTCGCACAG TGCAGGCAAA 000640 000641 TCACACGGAC CTCAGAGCAG GGTCCCTGGC CGTGAAAACT CAAAAGACAC AGTCTTTAAA ATAAGGACAG AAAACTGTAT 000720 000721 TTAGTGCCAC AATAAAGCTG TGTCACAAAC TACCC |
Predicted Small Protein
Name | NONHSAT087174_smProtein_449:703 |
Length | 85 |
Molecular weight | 9018.2089 |
Aromaticity | 0.0119047619048 |
Instability index | 50.3035714286 |
Isoelectric point | 11.2321166992 |
Runs | 12 |
Runs residual | 0.00887170154686 |
Runs probability | 0.0154713537066 |
Amino acid sequence | MMLLLPAGTTAVAMSEQPAEWSGHTDTGEAPALPQPRARQNRLPIPREPRPPRSALGGRT VQANHTDLRAGSLAVKTQKTQSLK |
Secondary structure | LEEEELLLLEEEELLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLE EEELLLLLLLLLLEEEEHHHLLLL |
PRMN | - |
PiMo | - |