NONHSAT087926
Revision as of 00:25, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087926 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
570 nt |
Genomic location |
chr3-:10327434..10332598 |
Exon number |
4 |
Exons |
10327434..10327578,10328388..10328496,10331446..10331562,10332400..10332598 |
Genome context |
|
Sequence |
000001 AGCAATTCCG CAGGGCATCT GACCTCCACT GTTGACTTCT ACCCAGAGGA CAAGAACATT TTTAGTTCCC AAGGAATGTA 000080
000081 CATCAGCCCC ACGGAAGCTA GGCCACCTCT GGGATGGGGT TGCTGGTTTA GAACAAACGC CAGTCATCCT ATATAAGGAC 000160 000161 CTGACAGCCA CCAGGCACCA CCTCCGCCAG GAACTGCAGC AGAGAAAGGA GTCGAAGAAG CCACCAGCCA AGCTGCAGCC 000240 000241 CCGAGCTCTA GCAGGCTGGC TCCGCCCGGA AGATGGAGGT CAAGCAGAAG GGGCAGAGGA TGAACTGGAA GTCCGGTTCA 000320 000321 ACGCCCCCTT TGATGTTGGA ATCAAGCTGT CAGGGGTTCA GTACCAGCAG CACAGCCAGG CCCTGGGGAA GTTTCTTCAG 000400 000401 GACATCCTCT GGGAAGAGGC CAAAGAGGCC CCAGCCGACA AGTGATCGCC CACAAGCCTT ACTCACCTCT CTCTAAGTTT 000480 000481 AGAAGCGCTC ATCTGGCTTT TCGCTTGCTT CTGCAGCAAC TCCCACGACT GTTGTACAAG CTCAGGAGGC GAATAAATGT 000560 000561 TCAAACTGTA |
Predicted Small Protein
Name | NONHSAT087926_smProtein_272:475 |
Length | 68 |
Molecular weight | 7458.4158 |
Aromaticity | 0.0746268656716 |
Instability index | 53.7313432836 |
Isoelectric point | 11.3965454102 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0214706685295 |
Amino acid sequence | MEVKQKGQRMNWKSGSTPPLMLESSCQGFSTSSTARPWGSFFRTSSGKRPKRPQPTSDRP QALLTSL |
Secondary structure | LEEEELLLEELLLLLLLLLLEEEELLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLL HHHHHLL |
PRMN | - |
PiMo | - |