NONHSAT088996
Revision as of 00:28, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088996 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
563 nt |
Genomic location |
chr3-:37162955..37225180 |
Exon number |
6 |
Exons |
37162955..37163027,37170554..37170640,37190385..37190529,37196105..37196147,37216030..37216096,37225033..37225180 |
Genome context |
|
Sequence |
000001 GAAAAGTGAT GTACTGAAAT ACTGACCCTT CCAGCTGGTT AACTTTCATA ATCATGCATT TACTTTTCAA TGGCAACTGA 000080
000081 ATATATGACT GCCTGATGAT TCAGGGGAAA AAATGCAGTA TTGTGTGTGG AATTGGAAGA GATTCAAAAT GTGGGAAGAT 000160 000161 AAATGAAGGG GTCTAGATGT AAATGTCAGT GGAAAGGAGA GCTACCATCA CTAAGGTTTA TATTCTGCAA GATCCTGAAG 000240 000241 ATACTTTCCT TCTTTTCTGG CTGAAAACAC AGTTAAATCA CTTTCAAAGT TAAAAGACTA TTAAGAACAC AAGATGGGGA 000320 000321 CTCCTGCTTC TGGAAGGAAA AGAACACCTG TGAAAGACCG ATTTTCTGCA GAAGATGAAG CTTTGAGTAA CATTGCCAGA 000400 000401 GAGGCAGAGG CAAGGCTGGC AGCAAAACGG GCTGCCCGGG CAGAAGCAAG AGATATACGC ATGAGAGAAC TGGAACGACA 000480 000481 ACAAAAAGAG GGAGTTGAGG ATGCATTGTC CATTCGAAGT GTTGGCAGTC ACAGGGTTGG TATTTTAACT TGTCTACACA 000560 000561 ATA |
Predicted Small Protein
Name | NONHSAT088996_smProtein_182:292 |
Length | 37 |
Molecular weight | 4369.9926 |
Aromaticity | 0.138888888889 |
Instability index | 70.8722222222 |
Isoelectric point | 6.51861572266 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.00800211976684 |
Amino acid sequence | MSVERRATITKVYILQDPEDTFLLFWLKTQLNHFQS |
Secondary structure | LLEEEEEEEEEEEEEELLHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |