NONHSAT089830
Revision as of 00:32, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089830 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
676 nt |
Genomic location |
chr3-:50378541..50379879 |
Exon number |
4 |
Exons |
50378541..50378916,50379005..50379130,50379241..50379362,50379828..50379879 |
Genome context |
|
Sequence |
000001 GGCTCAGGCG CGCTACTGCC TCACAAGTTT TGCCAAGGGA CGGCTACTCA AGATCCCAGA AATCTGGGAG CGGCTGGAGC 000080
000081 GAGAAAACAG AGGCAAGTGG CAGGCAATTG CCAAGCACCA GCTCCAGCAT GTGTTCAGCC CCTCAGAGCA GGACCTGCGG 000160 000161 CTGCAGGCGC GAAGGTGGGC TGAGACCTAC AGGCTGGATG TGCTAGAGGC AGTGGCTCCA GAGCGGCCCC GCTGTGCTTA 000240 000241 CTGCAGTGCA GAGGCTTCTA AGCGCTGCTC ACGATGCCAG AATGAGTGGT ATTGCTGCAG GGAGTGCCAA GTCAAGCACT 000320 000321 GGGAAAAGCA TGGAAAGACT TGTGTCCTGG CAGCCCAGGG TGACAGAGCC AAATGAGGGC TGCAGTTGCT GAGGGCCGAC 000400 000401 CACCCATGCC AAGGGAATCC ACCCAGAATG CACCCCTGAA CCTCAAGATC ACGGTCCAGC CTCTGCCGGA GCCCCAGTCT 000480 000481 CCGCAGTGGA GAGCAGAGCG GGCGGTAAAG CTGCTGACCG ATCTCCCTCC TCCTCACCCC AAGTGAAGGC TCGAGACTTC 000560 000561 CTGCCCCACC CAGTGGGTAG GCCAAGTGTG TTGCTTCAGC AAACCGGACC AGGAGGGCCA GGGCCGGATG TGGGGACCCT 000640 000641 CTTCCTCTAG CACAGTAAAG CTGGCCTCCA GAAACA |
Predicted Small Protein
Name | NONHSAT089830_smProtein_281:391 |
Length | 37 |
Molecular weight | 3743.1882 |
Aromaticity | 0.0277777777778 |
Instability index | 40.8555555556 |
Isoelectric point | 7.81219482422 |
Runs | 5 |
Runs residual | 0.0415695415695 |
Runs probability | 0.0346758523229 |
Amino acid sequence | MSGIAAGSAKSSTGKSMERLVSWQPRVTEPNEGCSC |
Secondary structure | LLEEEELLLLLLLLHHHHHHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |