NONHSAT089938

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT089938

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

456 nt

Genomic location

chr3+:52568541..52574542

Exon number

2

Exons

52568541..52568893,52574440..52574542

Genome context

Sequence
000001 GCACTGACCC GTCAACTCCC GGTTTCCCGG CGCACGCCCC TCGTGAGATG CTGTGGTCTT TTCTAGCAAC GTCGACAGGC 000080
000081 TTTCCAACAA AATTCCTCTT TCCTGCGCAG AACCGCTCTC CACTCGCATT TCTTCTGCTC AGATCCGTAT TCCGAGCCCG 000160
000161 CACGCATACC AGGCTGTGCT CAGGGTCCGG AGGAGGCCGA CCCAGTAGCC GTGGGCCCTG TCGGAGGGGA GCCAGCTGGG 000240
000241 CGCGCGTTGT TTTCTGAGGT GGCCGCGCTG TCTTTCAGGG TGTGTGTACA TTCGAAACtc cactgaacct tgattgaaga 000320
000321 cctacagtgt ggcagtccat ggcctgggga ctgATGATGT CTACCGTAGA AAAGCCTCAG AAAGACAGTA TCAGAGAAGG 000400
000401 CTGGAAGATG AATGAGACTG AACTTCAGCA GTCAATAAAG TCAATATGAA TTTTTA
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Predicted Small Protein

Name NONHSAT089938_smProtein_47:256
Length 70
Molecular weight 7630.8054
Aromaticity 0.130434782609
Instability index 57.3144927536
Isoelectric point 12.3690795898
Runs 9
Runs residual 0.0088965418281
Runs probability 0.0267522424386
Amino acid sequence MLWSFLATSTGFPTKFLFPAQNRSPLAFLLLRSVFRARTHTRLCSGSGGGRPSSRGPCRR
GASWARVVF
Secondary structure LLLLEEELLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLLLEEEELLLLLLLLLLLLLLLL
LLLEEEEEL
PRMN -
PiMo -