NONHSAT090214
Revision as of 00:34, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090214 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
708 nt |
Genomic location |
chr3-:63771662..63813121 |
Exon number |
2 |
Exons |
63771662..63771747,63812500..63813121 |
Genome context |
|
Sequence |
000001 CCAATCTTAC ACTTTCTCCT GCACGCATTT GCCTTTTGTT ATGGTCATGA CCTCAGTGGA CACCAACCCA GTCTTTGACA 000080
000081 AGGTAGCCAC CTCTCTCTCT CTTCGAGATT TAAGTTTTTC CCCTGAACCA TTGTGGAATT AGAAAAGTAA CCCTCTAACA 000160 000161 TGCAAGGCCC TCCCTTGGGT ATTCATTGTG GATTAAAGCA AATTTTCTAT CTATTTTCGA GAAATGTGGc tcaaggctca 000240 000241 gtcatttaca taccattgat ttgtctttcc tatatccagg agccaggtga actttggatt ccttaacatt ttaaaacata 000320 000321 tcaattcagt gcttaactcc ataaatgtat ttataaagga aactttaaaa cactaccata aatttaagac tagtatggta 000400 000401 aacaggcatt aaaattacta tgctaaaaac aaaactatgt tattTTTTGC AGAAGGCACT AAACCTGAGG TTACTCTCtt 000480 000481 tttctttttt tttttctgag atggagtctc gctctgtcgc acaggctgga gtgcagtggc atgatctagg ctcactgcaa 000560 000561 gctccacctc ccgggttcag gccattctcc tgcctcagcc tcccgagcag ctgggactac agTACTTCAT TTCCCCGGAG 000640 000641 GGCTCTGGCT TTATAATTGA CAGCATCGGA ACAATTTCCA CAGCAGCAGT TTTTGATTTT GAAAGTGA |
Predicted Small Protein
Name | NONHSAT090214_smProtein_419:655 |
Length | 79 |
Molecular weight | 8877.2153 |
Aromaticity | 0.153846153846 |
Instability index | 69.8487179487 |
Isoelectric point | 9.58746337891 |
Runs | 9 |
Runs residual | 0.0182926829268 |
Runs probability | 0.0196765392844 |
Amino acid sequence | MLKTKLCYFLQKALNLRLLSFSFFFSEMESRSVAQAGVQWHDLGSLQAPPPGFRPFSCLS LPSSWDYSTSFPRRALAL |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHLLEEELLLLLLLLLLLLLLLLLLL LLLLLLLLLLLHHHHHLL |
PRMN | - |
PiMo | - |