NONHSAT091227
Revision as of 00:38, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT091227 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1053 nt |
Genomic location |
chr3+:113079114..113080166 |
Exon number |
1 |
Exons |
113079114..113080166 |
Genome context |
|
Sequence |
000001 GTTATTATCA AGTGAGATAC ACCAGACACC TTATTATTGT AGAAACATGT AGATTGTATC ACATCCTATG GCTCAAAGAA 000080
000081 AGATGATTAT GAATACTATA TGTCTGAGTA TTTGAGAATG AGTGGTGTCT ATTGGGGTTT GACAGTATTG GATCTCATGG 000160 000161 GACAACTTCA CTGCATGAAT AGTGAAGAAA TTCTGACATT TATTAAGTCT TGCCAACATG AGTTTGGTAG AATAAGTGCT 000240 000241 AATATCAGAC ATGATCCTCA TCTTTTATAC ACTGTTAGTG CTGTCCAGAT TCTTACTCTG TATGATAGTA TTAATGTTAT 000320 000321 CGATGTAAAA AAGTTGTGGA ATATGTTCCA AGTCTATGGA AAGAAGATGT TTCTCTTGCT GGAGACTTTT GGGGTCCCAC 000400 000401 TGAGCAGCTG CTCTAACTGG AGCTAATGGT CTGCTGGAAG TTCCAGCGTG CACTGTGGTA GTTTTATCAG CATACAGAAT 000480 000481 TACTGGACCA GAGGGGGCCA GCCTGAAAGA TAAGGGATGA ACACAGTGCA GGGCAGAGAG ACCAACTGTT TCATAGGATG 000560 000561 GGAAAAATCT ACTTTTATAA AGTAGGGGGA AATTGATACA AGATTCTCTT TTTGTGTGGT GGAAACTGGC TCTCTTGGGG 000640 000641 AAGCTTGATG CTACTAATAT AAAAAAAAAA AAGGCAGTTG AATTTGTTTT ATCTGTGTAT GAATTTTGAT GGTGGATTTG 000720 000721 GTTGCAGACC AGGTTCTGAA TTCCATGCTG GGCACATTTA TTGTTGCACA GGATTCCTGG CTATTACCAA GTCAGTTGCA 000800 000801 TCAAGTAAAT TATGATTTAC TTGGTTAGTG GTTTTGTGAA TGAGTTACCC TTGGGTGGAT TTAATGGAAG GCCAGGGAAG 000880 000881 TTAGCAGGTG TATGCTATTC ATGGTGGGTG TTGGCTTTCC TAAAGATCAC TGGAAGCCTT CACTGGATTG AGAGAGATAA 000960 000961 ACCGCGTATG TAATTTCATC TGTCAGTCCT ACTTTTGGCA TGCCTGAAGA AGTGCTTCAG AGGGTGAATA TTCAGCCTGA 001040 001041 GCTAGTAAGC TAG |
Predicted Small Protein
Name | NONHSAT091227_smProtein_698:814 |
Length | 39 |
Molecular weight | 4010.5564 |
Aromaticity | 0.131578947368 |
Instability index | 43.1552631579 |
Isoelectric point | 7.76129150391 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0288376611907 |
Amino acid sequence | MNFDGGFGCRPGSEFHAGHIYCCTGFLAITKSVASSKL |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEELLLLEEEEEHHHHLLL |
PRMN | - |
PiMo | - |