NONHSAT092226
Revision as of 00:41, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092226 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
565 nt |
Genomic location |
chr3-:133786551..133787585 |
Exon number |
2 |
Exons |
133786551..133787014,133787485..133787585 |
Genome context |
|
Sequence |
000001 CGAGCATGTG CATGTGTGCA CTGATAATAT GTACCCCTGC AAGTCAGAGA GGGCACGTGC ACACCTACGC GTCTTTGCAA 000080
000081 ACTGCTGGAC ATCATCTGCT GCAGATGCAG AGGTCCTGCT CTGTGACCCA CACTCTGAGC TCTAAGGAGA AGGAAACACA 000160 000161 CCCACACCCA CACCCTTGAG AACTCACCAC AGGGAAGAGT CCACGGAGGC AGACCCAGAA CGGAGTGCAG AGAGCAATGG 000240 000241 GAACCGCCTG GGAATTGTTC TCAATTGTGT CCTCACGCCC ACACACTGAC CTCCCGGGGC TCTGCAGCCA GGCTCCCTGT 000320 000321 GCCTTCCTCG CCCCGGGGAG AGTCTGAACT CCCAGAATGC GTGTGTGTGC ATCCCCTGCC CCTGCAGAAG ACTCTCAACG 000400 000401 GATCCAGCTA AGTCACCAGC CCAAACGCAA GCCCAAGTCT TGGCGTGACA GGGGCATTCA GCACTCACAG TTTATCTGTG 000480 000481 GAGAAGAATC CCAGGCACTG GGTTTCAGAA TCAAGGGCAC TAGTGCGGAG GAAGTCTCCA TCAGCCCTCA CCTGACTCCT 000560 000561 GGCGC |
Predicted Small Protein
Name | NONHSAT092226_smProtein_5:178 |
Length | 58 |
Molecular weight | 6330.2507 |
Aromaticity | 0.0175438596491 |
Instability index | 51.9578947368 |
Isoelectric point | 8.50067138672 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.037813548843 |
Amino acid sequence | MCMCALIICTPASQRGHVHTYASLQTAGHHLLQMQRSCSVTHTLSSKEKETHPHPHP |
Secondary structure | LEEEEEEEELLLLLLLLEEEHHHHHHHHHHHHHHLLLLEEEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |