NONHSAT092226

From LncRNAWiki
Revision as of 00:41, 17 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT092226

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

565 nt

Genomic location

chr3-:133786551..133787585

Exon number

2

Exons

133786551..133787014,133787485..133787585

Genome context

Sequence
000001 CGAGCATGTG CATGTGTGCA CTGATAATAT GTACCCCTGC AAGTCAGAGA GGGCACGTGC ACACCTACGC GTCTTTGCAA 000080
000081 ACTGCTGGAC ATCATCTGCT GCAGATGCAG AGGTCCTGCT CTGTGACCCA CACTCTGAGC TCTAAGGAGA AGGAAACACA 000160
000161 CCCACACCCA CACCCTTGAG AACTCACCAC AGGGAAGAGT CCACGGAGGC AGACCCAGAA CGGAGTGCAG AGAGCAATGG 000240
000241 GAACCGCCTG GGAATTGTTC TCAATTGTGT CCTCACGCCC ACACACTGAC CTCCCGGGGC TCTGCAGCCA GGCTCCCTGT 000320
000321 GCCTTCCTCG CCCCGGGGAG AGTCTGAACT CCCAGAATGC GTGTGTGTGC ATCCCCTGCC CCTGCAGAAG ACTCTCAACG 000400
000401 GATCCAGCTA AGTCACCAGC CCAAACGCAA GCCCAAGTCT TGGCGTGACA GGGGCATTCA GCACTCACAG TTTATCTGTG 000480
000481 GAGAAGAATC CCAGGCACTG GGTTTCAGAA TCAAGGGCAC TAGTGCGGAG GAAGTCTCCA TCAGCCCTCA CCTGACTCCT 000560
000561 GGCGC
[back to top]

Predicted Small Protein

Name NONHSAT092226_smProtein_5:178
Length 58
Molecular weight 6330.2507
Aromaticity 0.0175438596491
Instability index 51.9578947368
Isoelectric point 8.50067138672
Runs 8
Runs residual 0.0135964912281
Runs probability 0.037813548843
Amino acid sequence MCMCALIICTPASQRGHVHTYASLQTAGHHLLQMQRSCSVTHTLSSKEKETHPHPHP
Secondary structure LEEEEEEEELLLLLLLLEEEHHHHHHHHHHHHHHLLLLEEEEEELLLLLLLLLLLLL
PRMN -
PiMo -