NONHSAT092615
Revision as of 00:43, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092615 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
574 nt |
Genomic location |
chr3+:148718721..148726063 |
Exon number |
5 |
Exons |
148718721..148718970,148719233..148719380,148721740..148721785,148725786..148725890,148726039..148726063 |
Genome context |
|
Sequence |
000001 ATTGAGTCCC ATAAGCAGAG TACAGTAATG TTTTAAAATA ATGTTTAACA GAAATGATTT GGTGCTACAT TGTATTAAAG 000080
000081 TGTAAAATTG ACCCCAGAGC TAGATTTTAA AATCTTTGTA GTTAATTAGG CTTCATGTTG GACCTGCCCA AAAAAAGAAT 000160 000161 GAAGGACTGA GATATTTCAA GATGGTACTT GTCCAAACCA AATGAGCTGA GAGATTTTGG TGTGCTTCAC TTGGTTCCCT 000240 000241 GACTTGATAG CCACCTGTCT CCAGCTTTGT AACTGTCAGA GATCATGAAC CCTGTGAGAA ATAGAGGAGG AGGAAGGGAC 000320 000321 TAATGTGTTA TAtgtatgca ggcttgtatg ctggtcattt tacctacttt ttcacttatt tctcaacagt cctgtgagGA 000400 000401 AACAAATAGG CCCAGTTTCT GATAAATGCA TCCATGGTTA CCAGATATGA AGTCCAGGAG CCCCAAGGGC TGAGCAGACA 000480 000481 CTTTGCTGTA TCATTGTAGC TGACGCTGGC CACAGTGGTG ACTGAGCAGG ATCTGCCCAG AGACTTTTGG GGAAAGTCTG 000560 000561 AAATCTTTAA CTGG |
Predicted Small Protein
Name | NONHSAT092615_smProtein_335:421 |
Length | 29 |
Molecular weight | 3174.6889 |
Aromaticity | 0.0714285714286 |
Instability index | 113.575 |
Isoelectric point | 4.52960205078 |
Runs | 7 |
Runs residual | 0.0467806841046 |
Runs probability | 0.0376258611552 |
Amino acid sequence | MQACMLVILPTFSLISQQSCEETNRPSF |
Secondary structure | LLEEEEEEELLLLEELLLLHHHLLLLLL |
PRMN | - |
PiMo | - |